Gene detail information of Glyur000274s00012535 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G22850.1 | 0 | Eukaryotic aspartyl protease family protein |
| NR | XP_003538162.1 | 0 | PREDICTED: aspartic proteinase-like protein 2-like [Glycine max] |
| Swissprot | tr|Q9S9K4|ASPL2_ARATH | 6.00E-88 | Aspartic proteinase-like protein 2 (Precursor) |
| trEMBL | tr|A0A072UJM0|A0A072UJM0_MEDTR | 0 | Eukaryotic aspartyl protease family protein {ECO:0000313|EMBL:KEH29934.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00274 | 27077 | 32251 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000274s00012535.1 | PF14543.1 | TAXi_N | 80 | 265 | 2.40E-35 |
| Glyur000274s00012535.1 | PF14541.1 | TAXi_C | 284 | 435 | 7.90E-29 |
| Glyur000274s00012535.2 | PF14543.1 | TAXi_N | 80 | 265 | 1.20E-35 |
| Glyur000274s00012535.2 | PF14541.1 | TAXi_C | 284 | 356 | 3.00E-12 |
| Glyur000274s00012535.3 | PF14541.1 | TAXi_C | 26 | 96 | 5.20E-12 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 15.416 |
| SRR1783600 | control | 14.327 |
| SRR1783602 | moderate drought stress | 19.485 |
| SRR1811619 | moderate drought stress | 20.130 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 21.977 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 21.520 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 16.043 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 15.174 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 24.278 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 23.570 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 10.206 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 10.326 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 17.332 |
| SRR2868004 | Drought Stress (root) | 20.092 |
| SRR2967015 | Control (root) | 20.751 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 10.839 |
| SRR9715740 | Leaf | 10.632 |
| SRR9715741 | Leaf | 10.219 |
| SRR9715739 | Root | 18.057 |
| SRR9715742 | Root | 20.663 |
| SRR9715743 | Root | 17.449 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 9.662 |
| SRR8749028 | MeJA induced 9h | 6.701 |
| SRR8749029 | MeJA induced 9h | 6.769 |
| SRR8749030 | Uninduced | 2.384 |
| SRR8749031 | Uninduced | 1.071 |
| SRR8749032 | Uninduced | 1.596 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 23.073 |
| SRR8400027 | Control - Root | 26.821 |