Gene detail information of Glyur000273s00014672.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G07890.6 | 3.00E-30 | ascorbate peroxidase 1 |
| NR | ABM45856.1 | 8.88E-64 | cytosolic ascorbate peroxidase [Arachis hypogaea] |
| Swissprot | tr|P48534|APX1_PEA | 1.00E-62 | L-ascorbate peroxidase, cytosolic |
| trEMBL | tr|A1Z1T1|A1Z1T1_ARAHY | 3.00E-64 | Cytosolic ascorbate peroxidase {ECO:0000313|EMBL:ABM45856.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00273 | 204689 | 208119 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| K00434 | E1.11.1.11 | EC:1.11.1.11 | Ascorbate and aldarate metabolism | map00053 |
| Glutathione metabolism | map00480 |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000273s00014672.1 | PF00141.18 | peroxidase | 26 | 113 | 1.80E-17 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.055 |
| SRR1783600 | control | 0.055 |
| SRR1783602 | moderate drought stress | 0.462 |
| SRR1811619 | moderate drought stress | 0.459 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.490 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.488 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.867 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.813 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 5.626 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 6.324 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.281 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.280 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 1.923 |
| SRR2868004 | Drought Stress (root) | 4.174 |
| SRR2967015 | Control (root) | 2.859 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1.155 |
| SRR9715740 | Leaf | 0.765 |
| SRR9715741 | Leaf | 1.685 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.233 |
| SRR9715743 | Root | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 3.185 |
| SRR8749028 | MeJA induced 9h | 3.702 |
| SRR8749029 | MeJA induced 9h | 4.511 |
| SRR8749030 | Uninduced | 2.551 |
| SRR8749031 | Uninduced | 2.121 |
| SRR8749032 | Uninduced | 2.448 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 1.839 |
| SRR8400027 | Control - Root | 0.828 |