Gene detail information of Glyur000273s00014665 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G45740.1 | 1.00E-137 | hydrolase family protein / HAD-superfamily protein |
| NR | KHN30228.1 | 0 | Hypothetical protein glysoja_010606 [Glycine soja] |
| trEMBL | tr|I1M4P8|I1M4P8_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA13G40510.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00273 | 146976 | 150169 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000273s00014665.1 | PF13344.1 | Hydrolase_6 | 41 | 145 | 1.70E-17 |
| Glyur000273s00014665.1 | PF13242.1 | Hydrolase_like | 278 | 365 | 9.20E-12 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 2.283 |
| SRR1783600 | control | 2.099 |
| SRR1783602 | moderate drought stress | 2.053 |
| SRR1811619 | moderate drought stress | 2.058 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 4.403 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 4.182 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 2.653 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 2.554 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 2.610 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 2.783 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 2.160 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.888 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 3.677 |
| SRR2868004 | Drought Stress (root) | 2.419 |
| SRR2967015 | Control (root) | 2.409 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 2.508 |
| SRR9715740 | Leaf | 3.812 |
| SRR9715741 | Leaf | 2.041 |
| SRR9715739 | Root | 2.266 |
| SRR9715742 | Root | 2.176 |
| SRR9715743 | Root | 1.919 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 4.021 |
| SRR8749028 | MeJA induced 9h | 3.100 |
| SRR8749029 | MeJA induced 9h | 3.275 |
| SRR8749030 | Uninduced | 0.671 |
| SRR8749031 | Uninduced | 2.185 |
| SRR8749032 | Uninduced | 2.131 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 3.771 |
| SRR8400027 | Control - Root | 4.073 |