Gene detail

Gene detail information of Glyur000273s00014657

Functional Annotation

Database	Orthologs	Annotation
TAIR	AT3G45850.2	P-loop containing nucleoside triphosphate hydrolases superfamily protein
NR	XP_003547492.1	PREDICTED: 125 kDa kinesin-related protein-like isoformX1 [Glycine max]
Swissprot	tr\|O23826\|K125_TOBAC	125 kDa kinesin-related protein
trEMBL	tr\|K7M9J6\|K7M9J6_SOYBN	Kinesin-like protein {ECO:0000256\|RuleBase:RU000394}

Sequence

Transcript Sequence

>Glyur000273s00014657.1
CCTATTTTTTCCTTCCAGCTCCCAAAAAAAGACACTCCCAATAAGAATAAGAAATTTATCTCGTTAAGCAATTGGTTGTGCAGTTCAGTGCAGTGCAGTGCAGTGCAGTGTTTTACTAGTTTGTAGAGTAGTCTTTGACTTTACGATTCCTCACGTGAAATTCTGTTTGAAACACCAGAGCACACTAGAACCTCATTTTGAAGGCCGGCACACACACATACACTTTTTCACTGATCAGGATTTAGGATTCGCTTTTTGCGAGGTTGAGATTGGAAGTTGCCAATGGAGGCTCAGCAGAGAAAAGGAGGATTGGTGCCGCTATCGCCGTCGCAAACGCCGCGCTCCACCGATAAGCCAGCGCGAGATCTGCGATCTGCAGATTCAAATTCCAGTAGTCACAACAAGTATGACAAAGAGAAAGGAGTCAATGTGCAGGTCCTGGTTCGGTGCAGGCCAATGAATGAAGATGAAATGAGGCTGCATACGCCTGTTGTGATTTCGTGTAACGAGGGTAGAAGGGAAGTTTCAGCTGTCCAGAATATAGCCAACAAGCAGATCGATAGAACCTTTGTGTTTGATAAGGTGTTTGGTCCTACCTCTCAACAGAAAGAACTGTATGACCAGGCTGTTTCTCCCATTGTGTTTGAAGTGCTTGAGGGCTATAACTGTACAATTTTTGCATATGGACAGACAGGAACGGGGAAGACATACACAATGGAAGGAGGCGCAAGAAAGAAGAATGGCGAATTTCCAAGTGATGCTGGTGTCATCCCAAGAGCCGTGAAACAGATTTTTGATATATTAGAAGCTCAGAATGCTGAGTATAGCATGAAAGTAACATTTTTGGAGCTCTACAACGAGGAAATAACTGATCTCTTGGCCCCTGAGGAGACTTCAAAATTTACAGATGATAAGTCTAAGAAACCGATTGCTTTAATGGAGGATGGGAAAGGGGGTGTTTTTGTCAGAGGTTTAGAAGAAGAGATCGTTTGCACTGCGAATGAAATTTACAAGATATTGGAAAAAGGTTCTGCAAAACGGCGTACGGCCGAGACTCTTCTTAACAAACAAAGCAGTCGTTCTCACTCTATATTTTCTATCACGATTCATATAAAGGAATGTACTCCGGAGGGTGAAGAAATGATTAAATGTGGGAAGCTAAATCTTGTGGACCTTGCGGGCTCTGAGAATATTTCGCGTTCTGGTGCAAGAGAGGGTAGAGCAAGGGAGGCTGGGGAGATAAATAAAAGCTTGCTTACACTTGGTCGAGTGATCAATGCTCTAGTTGAGCACTCAGGTCATGTTCCATATAGGGATAGCAAATTAACCAGACTGTTGAGGGATTCCTTGGGTGGTAAAACCAAGACATGTATTATTGCCACAGTATCACCTTCCATTCATTGTCTGGAAGAGACCCTTAGTACCTTGGATTATGCGCACCGTGCCAAAAATATCAAGAACAAACCAGAGGTTAATCAGAAAATGATGAAATCTGCAATGATTAAGGATTTGTATTCTGAAATTGACAGACTAAAGCAAGAGGTCTATGCTGCAAGAGAGAAGAATGGAATCTATATACCGCGCGATCGCTACCTTCACGAAGAAGCAGAGAAGAAGGCCATGACTGAAAAGATAGAACGCATGGAACTAGAAGCGGAATCTAAGGATAAGCAACTGATGGAGCTTCAAGAACTGAACAATTCTCAGCAACTTTTGACTGCTGAATTAAGTGTTAAACTTGAAAAAACTGAGAAAAGTCTAGAAGAAACGGAGCAGTCATTGTTTGATCTTGAGGAAAGGCACAAACAAGCAAATGCAACAATTAAGGAAAAGGAATTCTTGATATCAAATCTCCTAAGATCTGAGAAAGCACTCGTGGAACGTGCAGTTGACCTAAGAGCAGAGCTCGAGAATGCTGCATCGGATGTGTCAAACCTGTTTTCCAAAATTGAGCGGAAGGATAAAATTGAAGAAGGAAACAGAATACTTATCCAGAAATTCCAGTCTCAGTTAGCTCAGCAACTTGAAGCTTTGCACAAGACAGTTTCAGCAACTGTAATGCATCAAGAGCAGCAATTGAAGGACATGGAAGAAGATATGCAGTCTTTTGTATCAACAAAAGCAGAGGCTACTGAAGATCTTAGGACAAGGGTGGGAAAGTTGAAACACATGTATGGTTCTGGCATTAAAGCTTTGGATAATCTAGCTGAGGAGCTTAAAGTAAATAACCAATTAACTTATGAAGACTTGAAATCTGAAGTAGCTAAGCATTCATCTGCCTTGGAGGATCTTTTCAAAGGAATCGCCTTAGAAGCGGATTCGTTACTGAATGATCTTCAAAACAGTCTCCACAAGCAAGAGGCCAGTTTAACTGCTTATGCTCACCAACAACGAGAGGCACATGGCAGAGCAATCGAGACAACACGTGCAGTATCTAAAATAACGGTGAACTTCTTTGAGACGATAGACAGGCATGCATCCAGTTTGACCCAAATTGTGGAAGAAGCACAATTTGTCAATGATCAGAAATTGTGTGAACTTGAAAAGAAGTTTGAGGAGTGTACTGCTTATGAAGAAAAGCAACTGCTGGAGAAAGTGGCAGAAATGCTAGCAAGTTCAAATGCAAGAAAGAAAAAACTGGTTCAAGTGGCTGTTAACGATCTTCGAGAAAGTGCAAACTGTAGAACCAGTAAACTGCAGCAAGAAGCATTAACCATGCAGGACTCCACTTCTTCTGTCAAGGCAGAATGGAGAGTTCACATGGAAAGAACAGAATCCAACTATCAAGAGGATACTTCTGCTGTGGAATCTGGGAAGAAGGATCTTGTGGAGGTTCTTCAAATCTGCCTCAACAAGGCAAAAGTGGGTTCACAACAATGGAGAAATGCTCAAGAGTCCTTGCTTAGTTTAGAGAAGAGAAATGCTGCTTCTGTGGATACTATTGTTAGGGGAGGAATGGAAGCTAATCAAGCTCTACGTGCCCGATTCTCAAGTGCTGTGTCAACTACCCTTGAAGATGCAGGAACAGCAAACAAGGATATTAATTCATCCATTGATCATTCGTTGCAACTTGATCATGAAGCTTGTGGGAACATAAACTCTATGATTATCCCATGCTGTGGTGACTTGAGAGAATTGAAGGGTGGTCATTACCACAGAATTGTAGAGATAACTGAAAATGCAGGGCAATGTCTTCTCAATGAATACACGGTNGACGAACCATCTTGTTCAACACCAAGAAAGAGACTCTTCAACTTACCCAGCGTTTCATCCATAGAAGAACTAAGAACGCCATCATTTGAGGAACTATTGAAGTCATTCTGGGATGCAAGATCTAAACAAGCAAATGGAGATGTTAAACATATTGGGGCATTTGAAGCCGCTCAATCAGTGAGAGATTCCAGAGTTCCTCTGACTGCTATTAACTAGGACAGTCGAAATTTCTGTAAATAGCATATTGTTCAGGTGTAATTCCATATAAAATGATATATTCATTTATTATTATTATTTTTGGGAAATAGAGGNAAAAAAGAAGAGAAAAGGGTTAATCTTTGTGCAGGCCGGAATATGTAAGAAGGTTACCCTTTTGTAGTTTAGCTTCGCTTCCGCAAAGGAAGCAACTTATATGATGTCAGCTGAGATTGGTACGTAATGTGATTTTGGCTTGTTTGTATTAAATTTAGGCATTCCCAAACTCATATAACTGACACAGTCATGGCTAATGACGAAGAGAGAAATTGGACGATACAAGGAACTGAAGGG

Protein Sequence

>Glyur000273s00014657.1
MEAQQRKGGLVPLSPSQTPRSTDKPARDLRSADSNSSSHNKYDKEKGVNVQVLVRCRPMNEDEMRLHTPVVISCNEGRREVSAVQNIANKQIDRTFVFDKVFGPTSQQKELYDQAVSPIVFEVLEGYNCTIFAYGQTGTGKTYTMEGGARKKNGEFPSDAGVIPRAVKQIFDILEAQNAEYSMKVTFLELYNEEITDLLAPEETSKFTDDKSKKPIALMEDGKGGVFVRGLEEEIVCTANEIYKILEKGSAKRRTAETLLNKQSSRSHSIFSITIHIKECTPEGEEMIKCGKLNLVDLAGSENISRSGAREGRAREAGEINKSLLTLGRVINALVEHSGHVPYRDSKLTRLLRDSLGGKTKTCIIATVSPSIHCLEETLSTLDYAHRAKNIKNKPEVNQKMMKSAMIKDLYSEIDRLKQEVYAAREKNGIYIPRDRYLHEEAEKKAMTEKIERMELEAESKDKQLMELQELNNSQQLLTAELSVKLEKTEKSLEETEQSLFDLEERHKQANATIKEKEFLISNLLRSEKALVERAVDLRAELENAASDVSNLFSKIERKDKIEEGNRILIQKFQSQLAQQLEALHKTVSATVMHQEQQLKDMEEDMQSFVSTKAEATEDLRTRVGKLKHMYGSGIKALDNLAEELKVNNQLTYEDLKSEVAKHSSALEDLFKGIALEADSLLNDLQNSLHKQEASLTAYAHQQREAHGRAIETTRAVSKITVNFFETIDRHASSLTQIVEEAQFVNDQKLCELEKKFEECTAYEEKQLLEKVAEMLASSNARKKKLVQVAVNDLRESANCRTSKLQQEALTMQDSTSSVKAEWRVHMERTESNYQEDTSAVESGKKDLVEVLQICLNKAKVGSQQWRNAQESLLSLEKRNAASVDTIVRGGMEANQALRARFSSAVSTTLEDAGTANKDINSSIDHSLQLDHEACGNINSMIIPCCGDLRELKGGHYHRIVEITENAGQCLLNEYTVDEPSCSTPRKRLFNLPSVSSIEELRTPSFEELLKSFWDARSKQANGDVKHIGAFEAAQSVRDSRVPLTAIN

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00273	91597	98126	+

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0007018 microtubule-based movement

cellular_component
GO:0005871 kinesin complex

molecular_function

GO:0003777 microtubule motor activity

GO:0005524 ATP binding

GO:0008017 microtubule binding

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000273s00014657.1	PF00225.18	Kinesin	55	391	3.30E-118

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	11.879
SRR1783600	control	11.848
SRR1783602	moderate drought stress	8.626
SRR1811619	moderate drought stress	8.465

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	12.383
DRR006520	Root Summer glycyrrhizin high producing strain	12.290
DRR006521	Root Winter glycyrrhizin high producing strain	2.898
DRR006522	Root Winter glycyrrhizin high producing strain	2.829
DRR006523	Root Summer glycyrrhizin low producing strain	9.358
DRR006524	Root Summer glycyrrhizin low producing strain	9.208
DRR006525	Leaf Summer glycyrrhizin high producing strain	4.821
DRR006526	Leaf Summer glycyrrhizin high producing strain	4.706

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	44.017
SRR2868004	Drought Stress (root)	31.987
SRR2967015	Control (root)	28.798

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	6.131
SRR9715740	Leaf	2.084
SRR9715741	Leaf	1.860
SRR9715739	Root	0.778
SRR9715742	Root	6.040
SRR9715743	Root	5.214

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	24.802
SRR8749028	MeJA induced 9h	22.566
SRR8749029	MeJA induced 9h	11.006
SRR8749030	Uninduced	2.913
SRR8749031	Uninduced	1.269
SRR8749032	Uninduced	1.388

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	32.086
SRR8400027	Control - Root	36.359