Gene detail information of Glyur000273s00014650 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G59970.1 | 2.00E-41 | Histone superfamily protein |
| NR | ACG30677.1 | 2.50E-66 | histone H4 [Zea mays] |
| Swissprot | tr|P0CG89|H4_SOYBN | 3.00E-67 | Histone H4 |
| trEMBL | tr|K7M9J2|K7M9J2_SOYBN | 6.00E-68 | Histone H4 {ECO:0000256|RuleBase:RU000528} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00273 | 58398 | 60570 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000273s00014650.1 | PF00125.19 | Histone | 72 | 138 | 6.40E-14 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 21.318 |
| SRR1783600 | control | 21.394 |
| SRR1783602 | moderate drought stress | 19.227 |
| SRR1811619 | moderate drought stress | 18.746 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 35.587 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 35.365 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 40.664 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 39.578 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 26.790 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 26.522 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 29.139 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 28.933 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 231.034 |
| SRR2868004 | Drought Stress (root) | 123.998 |
| SRR2967015 | Control (root) | 123.797 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 111.989 |
| SRR9715740 | Leaf | 34.105 |
| SRR9715741 | Leaf | 53.878 |
| SRR9715739 | Root | 70.002 |
| SRR9715742 | Root | 49.138 |
| SRR9715743 | Root | 56.714 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 310.008 |
| SRR8749028 | MeJA induced 9h | 206.233 |
| SRR8749029 | MeJA induced 9h | 301.357 |
| SRR8749030 | Uninduced | 57.033 |
| SRR8749031 | Uninduced | 28.004 |
| SRR8749032 | Uninduced | 39.262 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 201.019 |
| SRR8400027 | Control - Root | 195.158 |