Gene detail information of Glyur000273s00014643 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G59730.2 | 3.00E-138 | exocyst subunit exo70 family protein H7 |
| NR | XP_003547470.1 | 0 | PREDICTED: exocyst complex component EXO70B1-like [Glycine max] |
| Swissprot | tr|Q9LZD3|E70A1_ARATH | 1.00E-78 | Exocyst complex component EXO70A1 |
| trEMBL | tr|I1MDK3|I1MDK3_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA15G04750.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00273 | 5335 | 7185 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000273s00014643.1 | PF03081.10 | Exo70 | 244 | 594 | 5.40E-89 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 5.808 |
| SRR1783600 | control | 5.728 |
| SRR1783602 | moderate drought stress | 4.866 |
| SRR1811619 | moderate drought stress | 4.725 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 312.576 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 309.332 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 7.614 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 7.659 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 360.622 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 352.899 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 20.950 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 18.785 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 5.499 |
| SRR2868004 | Drought Stress (root) | 10.903 |
| SRR2967015 | Control (root) | 153.943 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 81.954 |
| SRR9715740 | Leaf | 113.514 |
| SRR9715741 | Leaf | 85.297 |
| SRR9715739 | Root | 710.034 |
| SRR9715742 | Root | 720.013 |
| SRR9715743 | Root | 720.509 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 225.256 |
| SRR8749028 | MeJA induced 9h | 336.751 |
| SRR8749029 | MeJA induced 9h | 115.691 |
| SRR8749030 | Uninduced | 83.280 |
| SRR8749031 | Uninduced | 10.205 |
| SRR8749032 | Uninduced | 30.134 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 33.823 |
| SRR8400027 | Control - Root | 79.044 |