Gene detail

Gene detail information of Glyur000272s00017867.1

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT1G22380.1	6.00E-74	UDP-glucosyl transferase 85A3
NR	KHG01935.1	0	UDP-glycosyltransferase 85A1 [Gossypium arboreum]
COG	YP_003204087.1	1.00E-06	UDP-glucuronosyl/UDP-glucosyltransferase [Nakamurella multipartita DSM 44233]
Swissprot	tr\|U3U992\|UGT8_CATRO	5.00E-162	7-deoxyloganetic acid glucosyltransferase
trEMBL	tr\|V7CM65\|V7CM65_PHAVU	0	Uncharacterized protein {ECO:0000313\|EMBL:ESW30350.1}

Sequence

Transcript Sequence

>Glyur000272s00017867.1
ATGCAGCAAAATGCAGAAGCTACTACTGTTACCCATGTGATGCTCTTTCCTTGTCCAGGNCAAGGCCATATTAACTCCATGCTCAAGCTTGCTCAGCTTCTTTCCCTCCACCATCTCAATGTCACCTTCCTCAACACCGAGCACATCCACCACCGTCTCCTCCATTTCGGTCACATCAAAGCTCTTTCAGCAACCTACCCTACCCTTCAATTCAAGACCATCCCTGATAGCCTCCCTCTTAACTACAACCCTCGTTCTGGAGAACTCTTTAATTACATAAATTTGCATGCAAAACCTTTCTTGACAGAAATTCTGCTCCATGCAGAGCCCAAAGTCACATGCTTCATAGCCGATGCATTCTTTGGAGGCCTCGCCACTGATGTANCACACGAGGTTGGGATACCAATCATTCACTATCTCGCTGTCAGTGCTTCCTCCTTTTGGGCTTTCTTTTGTGTTCCAAAACTCTTTGAATGCAATGAACTTCCAATTAGAGGGGAGGAAGACATGGACCGCATAATAACCAGCATACCAGGCATGGAAAACTTGCTCCGCTGTCGAGATCTCCCAAGTTTATGTCGGCAAACCGATGACAATGCAGTGTTCCCTCTGAAATCCATTGTCTCGGAGACTCNCCAAACGCTTCGAGCCCGCGCCCTCGTACTCAACACGTTCGAGGAACTAGAAGGCCCCGTGTTGTCCCAGATACGCTTAAAATTTCCCAAAGTCTTCACCATTGGTCCCGTCCACGCACACCTGAGCTCCAGAACGAAAACAGCGTCGTCGTCCAACACCGAAACGACACCGCTCGCGAGCTGTCTCTGGGAAGAGGACAAGAGCTGCATGAAGTGGCTAGACTCTCAGCCATTGAGATCAGTGATATATGTCAGCTTTGGNAGCGTCGCGGTTGTGAAGAGGGAAGAGGTCATGGAGATTTGGCACGGATTGGTGAATAGCAAGAAACGATTCCTGTGGGTAATAAGGCCTGACAGGATGGTGCCAGGATCAAAAGAGGGTAGCACGATGGAACTAGAGGAGGGGACAAGGGAGAGAGGGCTTATTGTTGAGTGGGCCCCGCAAGAGGAGGTGCTGGCCCATTGGGCCGTTGGGGGGTTCTTGACGCATAGTGGATGGAACTCTACCTTGGAGAGTGTGGTGGCTGGGGTGCCCATGGTTTGTTGGCCTTGCCATGGGGATCAGCACACTAACAGCAGGTTCGTGAGTGAGGTTTGGGGAGTTGGGTTGGACATGAAGGATGTGTGTGACAGAGACGTCGTGGAGAAAATGGTCAATGATGTCATGGTGCATAGGAGGGAGGAGTTTCTCAGATTGGCTCGGNAAATGGCTGAGTTGGCATGCAAGAGTGTGAGTCCTGGTGGTTCTTCTTACTCCAATCTTGACCATTTGATCCAGTACATAAAATCAATTGTGAAAATGGAAAGAATATGGATGGAAGCTAAAGGGGAAAAGTCCTCTGTACAAACTGCATCTGCGTCCGCACATGTGCTCATCTTCCCTTGTCCAGCGCAAGGCCATGTAAACTCCATGCTCAAACTCGCTGAGCTTCTCGCGCTTCACGATATCCACGTGACCTTCCTCAACACAGAGTACATCCACAAACGCCTCCTTCGTTTCGGTGACATTCAGGCCGTTTCGGAGTGTTACCCGAAACTTCAATTTAAAACCATTTCTGATTTTCATAGTGAGAAGGAGCATCCCGGATTCGGAGCACGGGCAGCTAGAGATGTCATGATGTCCATGTATTTGTACGCTAAGCCTTTGTTGAGAGATATTATTATGGTCTCTGAGAGTCCAGGAACACCCAAAATCAGTTGCGTTGTGCAGGATGGGAGCTTTGGTAGCCTTACCACTGACTTGGCTGCTGAGCTTGGGATACGACTCATTCATTTCCGTACCATCAGTGCCTGTTGCTTCTGGGCTTATTTCTGTGTTCCAATGCTCTTTCAGTGTAATGAGCTTCCCATTAGAGGAGAGGAGGACATGGATCGCATCATAAGCAATATGCCAGGAATGGAAAACTTGCTTCGGTGTAGAGATCTCCCAAGTTTCTGCCGATCAGGAAACAAAAGTGACGATTTGCCTCTGGACTCTATTGTCCAATGGACCCAACAATCACTCGAAGCAGATGCCCTCATACTCAACACATTCGAGGAACTAGAAGCCCCTGTCCTGTCCCAAATTCGTCTTCGCTTCCCAAAACTCTACACCATTGGCCCCCTCCACCACCATCTCAACACAAGAAAAACAGCTGCCAAAACATCCTTTAAGAGCAATTTGTACGAAGTGGATAGGANCTGCATGGCGTGGCTCGATGCTCAGCCACAGAGGTCAGTCATATATGTAAGCTTCGGCAGCACCACGCCTTTGAAGAGTGAACAACTCATGGAGATTTGGCACGGCTTGGTGAGTAGCAAGAAGCGGTTCTTGTGGGTGATGAGGCCCGACATGGGTAGTAGTAAGGACCGTGTTGATGATGTACCTGTGGAACTGGAAGAAGGGACCAGGGAGAGGGGGCTCATTGTGGGAGTGGGCCCCGCAAGAGGAGGTGTTGGCCCATTGGGCCGTTGGTGGGTTCTTGACACACAGCGGGTGGAACTCTACATTGGAGAGTGTGGATGCTGGGGTGCCCATGGTTTGCTGGCCTTATTTTGCGGATCAGCAGGTTAATAGTAGGTTTGTGAGTGAGGTGTGGAGACTTGGGTTGGACATGAAGGATGTGTGCGACAGGAATGTTGTGGAGAACATGGTCAACNATGTCATGGTCCATCGGAGTGAGGAGTTTCTTAGATCCGCTCGGAAAATNGCTGAGTTGGCTTGCAAGAGTGTGAGTCCTGGTGGTTCCTCTTACACCAACCTGGACGATTTGATTCAGTTTATAAAATCAACTAGCTCACAAAACCATTGATTACGGCACTGTTTGTCCAATTTGCTCGTTCAGGTTCCTTGTTAAACACTATCCATTATATAAACTGAATCAATTCATGGATTTGTATCATAATT

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00272	189419	199442	-

Gene family

Gene family	subfamily
Carbohydrate-Active enzymes Family	GT1

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0008152 metabolic process

molecular_function
GO:0016758 transferase activity, transferring hexosyl groups

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000272s00017867.1	PF00201.13	UDPGT	272	444	1.20E-28

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	5.899
SRR1783600	control	5.823
SRR1783602	moderate drought stress	1.478
SRR1811619	moderate drought stress	1.436

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	9.615
DRR006520	Root Summer glycyrrhizin high producing strain	6.128
DRR006521	Root Winter glycyrrhizin high producing strain	1.497
DRR006522	Root Winter glycyrrhizin high producing strain	1.388
DRR006523	Root Summer glycyrrhizin low producing strain	1.726
DRR006524	Root Summer glycyrrhizin low producing strain	1.046
DRR006525	Leaf Summer glycyrrhizin high producing strain	12.262
DRR006526	Leaf Summer glycyrrhizin high producing strain	12.798

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	1.697
SRR2868004	Drought Stress (root)	1.869
SRR2967015	Control (root)	1.360

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	13.307
SRR9715740	Leaf	12.881
SRR9715741	Leaf	10.494
SRR9715739	Root	6.683
SRR9715742	Root	4.865
SRR9715743	Root	5.117

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	3.585
SRR8749028	MeJA induced 9h	1.674
SRR8749029	MeJA induced 9h	1.891
SRR8749030	Uninduced	0.529
SRR8749031	Uninduced	0.414
SRR8749032	Uninduced	0.427

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	3.724
SRR8400027	Control - Root	3.616