Gene detail information of Glyur000272s00017852 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G38060.2 | 4.00E-10 | |
| NR | XP_004288520.1 | 1.44E-82 | PREDICTED: uncharacterized protein LOC101301139 [Fragaria vesca subsp. vesca] |
| trEMBL | tr|I1J508|I1J508_SOYBN | 1.00E-82 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA01G02820.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00272 | 108470 | 110551 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 25.845 |
| SRR1783600 | control | 23.321 |
| SRR1783602 | moderate drought stress | 17.491 |
| SRR1811619 | moderate drought stress | 17.296 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 45.331 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 46.652 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 10.097 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 9.742 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 38.744 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 39.844 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 29.864 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 21.794 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 60.001 |
| SRR2868004 | Drought Stress (root) | 53.939 |
| SRR2967015 | Control (root) | 48.492 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 25.601 |
| SRR9715740 | Leaf | 49.284 |
| SRR9715741 | Leaf | 35.981 |
| SRR9715739 | Root | 16.424 |
| SRR9715742 | Root | 21.118 |
| SRR9715743 | Root | 14.653 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 17.213 |
| SRR8749028 | MeJA induced 9h | 10.617 |
| SRR8749029 | MeJA induced 9h | 14.172 |
| SRR8749030 | Uninduced | 8.550 |
| SRR8749031 | Uninduced | 4.708 |
| SRR8749032 | Uninduced | 4.655 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 62.336 |
| SRR8400027 | Control - Root | 52.169 |