Gene detail information of Glyur000271s00015172 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G28460.1 | 5.00E-107 | methyltransferases |
| NR | XP_003543613.1 | 3.36E-177 | PREDICTED: uncharacterized protein LOC100794653 isoform X1 [Glycine max] |
| COG | YP_002521352.1 | 1.00E-27 | N6-adenine-specific methylase [Thermomicrobium roseum DSM 5159] |
| trEMBL | tr|I1LWH0|I1LWH0_SOYBN | 1.00E-177 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA13G04900.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00271 | 162619 | 167640 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000271s00015172.1 | PF03602.10 | Cons_hypoth95 | 114 | 310 | 3.40E-41 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 15.263 |
| SRR1783600 | control | 15.489 |
| SRR1783602 | moderate drought stress | 12.934 |
| SRR1811619 | moderate drought stress | 12.954 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 11.667 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 11.489 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 9.156 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 8.600 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 7.693 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 8.248 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 19.192 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 18.758 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 11.787 |
| SRR2868004 | Drought Stress (root) | 12.034 |
| SRR2967015 | Control (root) | 10.867 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 14.873 |
| SRR9715740 | Leaf | 16.730 |
| SRR9715741 | Leaf | 15.473 |
| SRR9715739 | Root | 3.264 |
| SRR9715742 | Root | 8.239 |
| SRR9715743 | Root | 7.708 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 3.222 |
| SRR8749028 | MeJA induced 9h | 5.332 |
| SRR8749029 | MeJA induced 9h | 1.865 |
| SRR8749030 | Uninduced | 1.790 |
| SRR8749031 | Uninduced | 0.673 |
| SRR8749032 | Uninduced | 0.398 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 15.268 |
| SRR8400027 | Control - Root | 15.639 |