Gene detail information of Glyur000271s00015171 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G28455.1 | 7.00E-05 | CLAVATA3/ESR-RELATED 25 |
| NR | XP_003543604.1 | 6.93E-40 | PREDICTED: CLAVATA3/ESR (CLE)-related protein 25-like [Glycine max] |
| Swissprot | tr|Q8LFL4|CLE25_ARATH | 1.00E-08 | CLE25p (Precursor) |
| trEMBL | tr|K7LXE3|K7LXE3_SOYBN | 9.00E-40 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA13G04895.1} (Fragment) |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00271 | 158560 | 159203 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 5.602 |
| SRR1783600 | control | 5.143 |
| SRR1783602 | moderate drought stress | 4.417 |
| SRR1811619 | moderate drought stress | 4.220 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 2.882 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 1.570 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.081 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.413 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1.693 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 2.294 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.978 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.729 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 22.025 |
| SRR2868004 | Drought Stress (root) | 13.304 |
| SRR2967015 | Control (root) | 16.902 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1.344 |
| SRR9715740 | Leaf | 0.327 |
| SRR9715741 | Leaf | 0.313 |
| SRR9715739 | Root | 1.442 |
| SRR9715742 | Root | 3.310 |
| SRR9715743 | Root | 2.663 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.632 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.657 |
| SRR8749031 | Uninduced | 1.911 |
| SRR8749032 | Uninduced | 0.386 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 16.515 |
| SRR8400027 | Control - Root | 16.175 |