Gene detail

Gene detail information of Glyur000271s00015164

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT2G37440.1	7.00E-59	DNAse I-like superfamily protein
NR	XP_003618414.1	0	Synaptojanin-1 [Medicago truncatula]
Swissprot	tr\|Q9LR47\|IP5P3_ARATH	1.00E-58	Type I inositol 1,4,5-trisphosphate 5-phosphatase CVP2
trEMBL	tr\|G7KJZ3\|G7KJZ3_MEDTR	0	Inositol polyphosphate 5-phosphatase I {ECO:0000313\|EMBL:AES74632.1}

Sequence

Transcript Sequence

>Glyur000271s00015164.1
ATGGTCCAAAAGGAGGAACATTACGATGGAGCACAGGATGAGAGTGATGGTTATGGGGNTAGTGATCTTTCCCTTCAGTCACTGGAATTTGATCCATGCATTTCAACAAACAAGCTAAGGATCTTTGTTGGNACTTGGAATGTTGCTGGAAGATCCCCTGTTGGAAGCTTGGCTGTTGATTTGGATGAGTGGTTGAATCTCAAGAATGCTGCAGATATATATGATCCAGCTGTGGCAACAAGCTGGAATGAGCTAATAGGAAGAACACTAAACAACAAGTTTGGGTATCCATGTCTAACACCATCAAATGATCATGACAATTATCATCATCATCATGATCATGATCACAGCAAGTACAGGATGGTGGCTAGCAAGAAGATGGTTGGGGTATTCATCAGTGTGTGGCTGAGGGAACAAGTGTTGGAGAAGTATTGTGTCTCAAATGTGAGAGTTTCCTCAGTGGCATGTGGGGTAATGGGATATTTGGGAAACAAAGGGTGTGTGGCAGTTAGCATGTTGATTGAAGGGACAAGCTTTTGTTTTGTAGCAGCACACTTAGCATCAGGGGAGAAGAAAGGTGATGAAGGGAGAAGGAACCATCAGGATCACTTGGCCAGGCATTTGATAAGAAAGCAAGATTGGAAGGCTTTGCAAGAGTTTGACCAGCTTCAAAAAGAGCTACAAGAAGGTGGAGTATTTGAGGGTTGGAAAGAAGGTAACATAGAATTTGCCCCCACATATAAATACTCATCCTCCACTAGCAATATATACTGTGGTGGTGGCCTTCCAAGTAGATCAGGGGAAAAGCAAAGAACACCAGCATGGTGTGATAGAATTCTATGGTATGGTAAAGGAGTAGAGCAACTTCACTATATTAGGAGTGAAAGCAAGTTCTCTGATCATCGCCCTGTTTCAGCACTTTTCTCTACACAAATTGAGATTAAGTCATCTAGTAGAGGACTTGTGGAATTGCACAATATCCCCCCAACAATGTTGCACTCCAATCATGGGTTGAACAAAGGAGAAGATGGAAAATCTACCGCACTNTAATTGTTAATGAAGAATGTACAAGGCTGCTAATACAAGCAATCAAAACTTTATATTAAAAAGATGATGACACATGTTTTCAGCCAGGTTATGGTCATCAGAAAAATGACACAAAATTGCAATACTTACCCAAAAACCCAACATTTTTTTAGATATCAGGAATTCAAAGGTTAAGATTAGACTGCAAGATGTAGTAAATTAAATACAATTTCTTGTGGAGAATCATGTTGGATCTTAGATCAAATA

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00271	121522	127364	-

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0046856 phosphatidylinositol dephosphorylation

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000271s00015164.1	PF03372.18	Exo_endo_phos	45	301	6.50E-10

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	0.632
SRR1783600	control	0.657
SRR1783602	moderate drought stress	6.112
SRR1811619	moderate drought stress	5.436

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	0.571
DRR006520	Root Summer glycyrrhizin high producing strain	0.692
DRR006521	Root Winter glycyrrhizin high producing strain	0.000
DRR006522	Root Winter glycyrrhizin high producing strain	0.000
DRR006523	Root Summer glycyrrhizin low producing strain	0.210
DRR006524	Root Summer glycyrrhizin low producing strain	0.256
DRR006525	Leaf Summer glycyrrhizin high producing strain	36.834
DRR006526	Leaf Summer glycyrrhizin high producing strain	37.278

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	0.304
SRR2868004	Drought Stress (root)	0.130
SRR2967015	Control (root)	0.229

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	30.870
SRR9715740	Leaf	61.584
SRR9715741	Leaf	57.480
SRR9715739	Root	0.133
SRR9715742	Root	0.323
SRR9715743	Root	0.500

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	4.219
SRR8749028	MeJA induced 9h	1.047
SRR8749029	MeJA induced 9h	0.716
SRR8749030	Uninduced	0.326
SRR8749031	Uninduced	0.589
SRR8749032	Uninduced	0.642

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	0.480
SRR8400027	Control - Root	1.109