Gene detail information of Glyur000271s00015150 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G43150.1 | 9.00E-13 | |
| NR | KHN34165.1 | 2.72E-36 | hypothetical protein glysoja_033358 [Glycine soja] |
| trEMBL | tr|C6SVK1|C6SVK1_SOYBN | 3.00E-36 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA19G01860.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00271 | 7878 | 14138 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 9.170 |
| SRR1783600 | control | 8.886 |
| SRR1783602 | moderate drought stress | 12.865 |
| SRR1811619 | moderate drought stress | 13.026 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 35.455 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 32.029 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 16.688 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 16.440 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 31.510 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 34.379 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 32.183 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 32.303 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 15.170 |
| SRR2868004 | Drought Stress (root) | 23.013 |
| SRR2967015 | Control (root) | 18.963 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 47.370 |
| SRR9715740 | Leaf | 43.430 |
| SRR9715741 | Leaf | 28.619 |
| SRR9715739 | Root | 9.881 |
| SRR9715742 | Root | 11.296 |
| SRR9715743 | Root | 11.047 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.088 |
| SRR8749028 | MeJA induced 9h | 0.696 |
| SRR8749029 | MeJA induced 9h | 0.258 |
| SRR8749030 | Uninduced | 0.310 |
| SRR8749031 | Uninduced | 0.251 |
| SRR8749032 | Uninduced | 0.206 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 27.505 |
| SRR8400027 | Control - Root | 33.769 |