Gene detail information of Glyur000270s00013300 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G17000.1 | 2.00E-61 | |
| NR | XP_004485651.1 | 0 | PREDICTED: DNA ligase 1-like isoform X2 [Cicer arietinum] |
| trEMBL | tr|K7M9W9|K7M9W9_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA15G06721.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00270 | 180630 | 183812 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 3.101 |
| SRR1783600 | control | 3.096 |
| SRR1783602 | moderate drought stress | 1.762 |
| SRR1811619 | moderate drought stress | 1.712 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 4.555 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 4.422 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.365 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.318 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1.058 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 1.038 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.080 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.203 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 9.504 |
| SRR2868004 | Drought Stress (root) | 4.344 |
| SRR2967015 | Control (root) | 5.124 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1.899 |
| SRR9715740 | Leaf | 0.164 |
| SRR9715741 | Leaf | 0.418 |
| SRR9715739 | Root | 0.183 |
| SRR9715742 | Root | 0.994 |
| SRR9715743 | Root | 0.369 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 15.545 |
| SRR8749028 | MeJA induced 9h | 13.093 |
| SRR8749029 | MeJA induced 9h | 7.976 |
| SRR8749030 | Uninduced | 0.962 |
| SRR8749031 | Uninduced | 1.198 |
| SRR8749032 | Uninduced | 1.304 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 5.651 |
| SRR8400027 | Control - Root | 4.578 |