Gene detail

Gene detail information of Glyur000270s00013299.1

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT2G14260.1	5.00E-162	proline iminopeptidase
NR	XP_003545761.1	0	PREDICTED: proline iminopeptidase-like [Glycine max]
COG	YP_004861800.1	3.00E-153	prolyl aminopeptidase, serine peptidase, MEROPS family S33 [Candidatus Chloracidobacterium thermophilum B]
Swissprot	tr\|P93732\|PIP_ARATH	0	Proline iminopeptidase
trEMBL	tr\|I1ME45\|I1ME45_SOYBN	0	Proline iminopeptidase {ECO:0000256\|RuleBase:RU003421}

Sequence

Transcript Sequence

>Glyur000270s00013299.1
CAATTTCGAGTAATAAGTGGGCCTAACATCATCTGTTTTTTCACATTGCGACGTGCCAATCCCAATGGGAAATGCTAATCACCATCGCAAGTGCATAAATCACAAATCATAAAATAACCCCACAAGAATGAAGTTGGGTGTAGTTCCAAACACCCTTCCATCCTTTACTACCTTGTCACCTCCCCTATTTCTCACCCCTCCCATCTCACTTCCATTTTCGCAGTCCCAAACCACATCCTCAGGGAGGAAGAGCTCAATTTTTCGTGTGCAGAACATTGATCATAAAATTGAGCCAATACCTAGTACTAGTCATTTGATGATGGCTTCAGAAAACAGAAATCTTTACCCACATATTGAACCGTACAGTACTGGTTTTTTGAAGGTTTCAGATCTTCACACTATCTACTGGGAACAATCAGGAAACCCCAGTGGACATCCGGTCATCTTCCTTCATGGAGGCCCTGGAGGGGGAACTTCCCCGAGTAATCGGAGATTTTTTGATCCCAACTTTCACCGAATCATACTATTTGATCAGCGAGGTGCTGGGAAAAGCACACCACATGCTTGCTTAGATCATAACACCACATGGGACCTCATTGATGACATTGAAAAGTTAAGAGAACACTTGGAGATTCCGGAATGGCAGGTATTTGGTGGGTCATGGGGAAGCACGCTTGCCCTTGCATACAGCCAATCTCACCCAGACAAGGTTACTGGGATCGTCCTCAGGGGAATCTTTCTTTTAAGGAAGAAAGAGATTGATTGGTTTTACGAGGGTGGTGCTGCTGCAATATTCCCCGACGCTTGGGAGCCATTCAGAGATCTTATTCCAGAAAATGAGAGAGGATGCTTCGTTGATGCTTATAAGAAGAGATTAAACTCTGATGATATCAAAATTCAGTATGCAGCCGCTAGAGCATGGACCAAATGGGAAATGATGACTGCTCATCTTCTTCCAAATGAAGAGAACATCAAAAGAGGAGATGATGATAGCTTTTCACTGGCATTTGCAAGGATTGAAAACCACTATTTCGTGAACAAGGGATTCCTCCCCTCAGATTCATTCCTGTTGGACGGAGTTGATAAAATAAGGCATATCAACACCACAATCGTGCAGGGAAGATACGATGTTTGCTGTCCTATGATGTCAGCCTGGGATCTTCATAAAGCTTGGCCAGAGGCAGATTTTCGGGTGGTTCCAGATGCAGGACATTCAGCCAATGAACCAGGCATAGCTGCTGAACTTGTGGCNGCAAATGAGAAATTAAAAAACATAATCAAGAACAAAGGGGACTAAAGTGAGTTGACACTTGGCAAGCAAAGGAAAAAAAGGTGCTGTTGGGGAGACTAAGGGTATGTTAATTTGTGTCTTTTGCGTTTCNCGAATTCCAATGAAACATTCATATCCTTAGCCAGTTTGTTGTCTGCAAGGAAATAAATTGCAAGTGACCGTGTATTTCAAAACACTAGCATACTGCCAAAACTCANTAAGTTGCTTGCCTTCATCATTGTAACAATAGAAAGGCGCAGGCAGAAAATTCCGAATGATTGTGATCCATTTTGGGCCGGTAGTTCCAAGAT

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00270	175318	180254	+

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
K01259	pip	EC:3.4.11.5	Arginine and proline metabolism	map00330

Gene Ontology

biological_process
GO:0006508 proteolysis

cellular_component
GO:0005737 cytoplasm

molecular_function

GO:0004177 aminopeptidase activity

GO:0008233 peptidase activity

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000270s00013299.1	PF00561.15	Abhydrolase_1	129	365	1.40E-24

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	61.260
SRR1783600	control	61.379
SRR1783602	moderate drought stress	61.294
SRR1811619	moderate drought stress	60.878

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	94.920
DRR006520	Root Summer glycyrrhizin high producing strain	93.696
DRR006521	Root Winter glycyrrhizin high producing strain	109.375
DRR006522	Root Winter glycyrrhizin high producing strain	108.348
DRR006523	Root Summer glycyrrhizin low producing strain	65.510
DRR006524	Root Summer glycyrrhizin low producing strain	65.160
DRR006525	Leaf Summer glycyrrhizin high producing strain	26.742
DRR006526	Leaf Summer glycyrrhizin high producing strain	26.527

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	69.761
SRR2868004	Drought Stress (root)	91.259
SRR2967015	Control (root)	104.826

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	50.720
SRR9715740	Leaf	60.393
SRR9715741	Leaf	67.496
SRR9715739	Root	20.542
SRR9715742	Root	56.334
SRR9715743	Root	50.948

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	89.325
SRR8749028	MeJA induced 9h	100.760
SRR8749029	MeJA induced 9h	89.637
SRR8749030	Uninduced	59.364
SRR8749031	Uninduced	39.488
SRR8749032	Uninduced	74.316

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	82.527
SRR8400027	Control - Root	76.220