Gene detail information of Glyur000269s00013916 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G64405.1 | 7.00E-04 | |
| NR | AFK46700.1 | 4.82E-40 | unknown [Lotus japonicus] |
| trEMBL | tr|I3T2F8|I3T2F8_LOTJA | 2.00E-40 | Uncharacterized protein {ECO:0000313|EMBL:AFK46700.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00269 | 173197 | 173523 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 54.251 |
| SRR1783600 | control | 56.256 |
| SRR1783602 | moderate drought stress | 23.410 |
| SRR1811619 | moderate drought stress | 23.139 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 20.226 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 17.151 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 3.138 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 3.963 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 8.321 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 7.265 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 60.451 |
| SRR2868004 | Drought Stress (root) | 58.699 |
| SRR2967015 | Control (root) | 48.486 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1.375 |
| SRR9715740 | Leaf | 1.499 |
| SRR9715741 | Leaf | 1.363 |
| SRR9715739 | Root | 5.215 |
| SRR9715742 | Root | 23.286 |
| SRR9715743 | Root | 16.805 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 171.480 |
| SRR8749028 | MeJA induced 9h | 30.016 |
| SRR8749029 | MeJA induced 9h | 48.173 |
| SRR8749030 | Uninduced | 19.340 |
| SRR8749031 | Uninduced | 15.114 |
| SRR8749032 | Uninduced | 9.368 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 105.323 |
| SRR8400027 | Control - Root | 122.897 |