Gene detail information of Glyur000269s00013910 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G10970.4 | 8.00E-36 | |
| NR | KHN35074.1 | 6.68E-115 | hypothetical protein glysoja_004840 [Glycine soja] |
| trEMBL | tr|I1LG92|I1LG92_SOYBN | 5.00E-117 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA11G02020.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00269 | 149240 | 153326 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 65.056 |
| SRR1783600 | control | 64.918 |
| SRR1783602 | moderate drought stress | 101.320 |
| SRR1811619 | moderate drought stress | 101.029 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 58.226 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 60.507 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 235.517 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 228.003 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 88.499 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 88.463 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 58.244 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 59.221 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 122.750 |
| SRR2868004 | Drought Stress (root) | 165.527 |
| SRR2967015 | Control (root) | 146.294 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 74.212 |
| SRR9715740 | Leaf | 79.840 |
| SRR9715741 | Leaf | 102.796 |
| SRR9715739 | Root | 39.899 |
| SRR9715742 | Root | 73.148 |
| SRR9715743 | Root | 65.256 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 205.442 |
| SRR8749028 | MeJA induced 9h | 323.716 |
| SRR8749029 | MeJA induced 9h | 298.752 |
| SRR8749030 | Uninduced | 262.210 |
| SRR8749031 | Uninduced | 306.698 |
| SRR8749032 | Uninduced | 297.506 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 114.138 |
| SRR8400027 | Control - Root | 111.581 |