Gene detail information of Glyur000269s00013906 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G10955.2 | 2.00E-113 | alpha/beta-Hydrolases superfamily protein |
| NR | XP_006573812.1 | 0 | PREDICTED: GDSL esterase/lipase At4g10955 isoform X2 [Glycine max] |
| Swissprot | tr|Q680C0|GDL62_ARATH | 1.00E-144 | GDSL esterase/lipase At4g10955 |
| trEMBL | tr|I1JAE7|I1JAE7_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA01G43560.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00269 | 136097 | 138425 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000269s00013906.1 | PF01764.20 | Lipase_3 | 117 | 207 | 8.80E-06 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 39.938 |
| SRR1783600 | control | 39.976 |
| SRR1783602 | moderate drought stress | 29.717 |
| SRR1811619 | moderate drought stress | 29.710 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 35.661 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 35.315 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 6.086 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 5.241 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 28.317 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 28.274 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 14.276 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 14.536 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 34.455 |
| SRR2868004 | Drought Stress (root) | 28.397 |
| SRR2967015 | Control (root) | 27.340 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 10.051 |
| SRR9715740 | Leaf | 5.412 |
| SRR9715741 | Leaf | 5.472 |
| SRR9715739 | Root | 22.846 |
| SRR9715742 | Root | 23.252 |
| SRR9715743 | Root | 22.907 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 16.179 |
| SRR8749028 | MeJA induced 9h | 14.492 |
| SRR8749029 | MeJA induced 9h | 9.958 |
| SRR8749030 | Uninduced | 7.848 |
| SRR8749031 | Uninduced | 2.313 |
| SRR8749032 | Uninduced | 4.045 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 35.543 |
| SRR8400027 | Control - Root | 38.537 |