Gene detail

Gene detail information of Glyur000269s00013903

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT2G46500.2	1.00E-180	phosphoinositide 4-kinase gamma 4
NR	XP_003516722.1	0	PREDICTED: phosphatidylinositol 4-kinase gamma 4-like [Glycine max]
Swissprot	tr\|Q9SGW8\|P4KG2_ARATH	0	Phosphatidylinositol 4-kinase gamma 2
trEMBL	tr\|I1JAE9\|I1JAE9_SOYBN	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA01G43580.1}

Sequence

Transcript Sequence

>Glyur000269s00013903.1
CTACAATACCGTTCTCTCTTTCTCTCAATTTGCGTTTGTGTGTGTGTGTGTGTGTGTGTTGGGAAGTAATAACAGAGTTAATTGGAGCAGATAAGATCGGCGAAAACATCGCGCCCCTCGCTGGAATTAGTTGAAACCAAACCAACCAACGGCAACTTTCATTTCCCATCCATCTTTTGTAACTGCCTTTCCATTTAAGCTCTTACCCCTCCCACATTTCCCTTTGATTCTTTCCCTCTGGTAAGAATCCACTCTCGCGTCGCTATCATTCCTCACGCCAATTCTTTCGAGAGATTCATTTCATTTCATTGCATTGCCCTAAATTTTTTTTTTGCGTTTCCCATTTTTTATTATAGTTATATGACACACACAACAAACAAAAACAATCCATTCTTTCATAAAATTTCATTTTTCTTCCAATAACATTTAATTCATATTTGGGGTCTCTTCGATCGCTTTGATTGAAAGACCTTCTGGTTCCTCTTCCTCGTCGATGGGTTCCCTCCGTTAATTACAGACCCCGTAACAATAACTCGAGTTGGTACAAATAGTAGGACTTGAGTTTATTAAAAAAAACAAAACAAAAAANTTGTTCCAAATTTGAAAGATGTCGGTTGCTGATGTTGCTCTGAGTCCGATTTTCAAAGAATCGGCACATTGGCATGATCAAATTGGGTGTGGCTCTTCTGGTGAATCGATCCTGATATATCTAACCGTTGACGGAGTTGTGACACCNATGCGCGTGTTGGAGTCCGATTCCATTGCCTCAGTGAAAATGAGGATTCAGACATGCAAAGGGATCAACACAGGGAAGAAGCACAAGCTGGTTTCTGGTGGCAGGGAGCTAGCACGCAACCACGCNCTCATCAGAGAGTACGGTGTAACCGCGGGGAATGTGGTTCACTTGGTTCTCCGTCTCTCTGACATGATCTTCATTGTGGTGAGGACAACATGTGGTAAGGAATTCGAGTTTCAGATCGACCGGCATAGAAATGTGGGGTATCTTAAGCAGTGCATAAAGAAGAAGAAGGGTAAGGGTTTCATTGATCTAGAAGAAGAGGATCAAGGGCTTTTCTGTGGTGGAGAAGAGCTTCATGATCAGAGGGTCTTCCGTGACATATGNAGCAAGAGTGATGATGATGTGATTCACCTCATAGTGAAGAAATCAGCAAAGGTTAAGGCTACTCCAGTTCACAAGGATTTGGAGCTTTCGGTCGTGGCAGCGGCGGCGGGTGGTGTTGGTGTAGGTGTAGGAGAGAATAATAATGTTCAGGTGGCAAAGGTAGCAACACCACAACCACAACCACCACCACCAAGTGTGGATGATGATTTCTGGTTGGAGCCAGTTTTTGTGAATCCTAGGACACGGTTTTTCCCTTTCCTTTGGGACATGATCGGCTCCACTTTCAATGGTTTGAAGAAGGGGAATCACCCTATCAGGTCCTCTGAGGGCACGGGTGGGACTTACTTCATGCAAGACTCAGACGGATTGGAGCATGTCTCGGTGTTTAAGCCCACTGATGAGGAGCCAATGGCTGTGAACAACCCGCGGGGCTTGCCAGTTTCATCCAACGGAGAGGGCCTGAAGAGAGGGACAAAGGTAGGGGAGGGAGCTGTGAGAGAAGTTGCAGCNTATGTGTTGGACCATCCAAGGGCTGGGCCGCGTTTGGTGTCTGGTGAGGCGATAGGCTTTGCCGGTGTTCCCCCTACGGTTATGGTCCAATGCCTACACGAGGCCTTTAATTACCCAGAAGAAGATCATGGGTATGGTGATGGTCTCTCATCAAGGGATCCCAAGATGGGGTCATTGCAGATGTTCATGAACAATGATGGTAACTGTGAGGACATTGGACCGGGGGCTTTTCCCGTGGAGGAGGTGCATAAGATCACCGTGCTTGATATCAGAATGGCTAACGCAGATAGGCATGCTGGGAATATATTGTTCAGGAAAGAGCCAAACGGACACACTTTGCTCATTCCCATTGATCACGGCTACTGTCTACCTGAGAAATTTGAGGATTGCACATTTGATTGGCTTTACTGGCCCCAAGCACGTCAGCCATACTCTCCTGATATAGTTGACTATATTAGGTCTCTGGATGCTGAAGAGGACATAGAACTCATGAAGTATTATGGGTGGGATGTTCCGGTTGAGTGTGCGCGAACACTCCGCATCTCNACCATGTTGTTGAAGAAAGGGGTGGAGAGGGGTCTCACTCCCTATGCCATTGGAAGCATCATGTGTAGGGAAAATCTGAACAAGGAATCTGTAATTGAGGATATTATCTGTGAAGCCCAGGAATCAGTGCTACCTGGTGTGGGGGAATCTGTTTTCCTTGAATCTGTGTCCCAGATCATGGATTCCCGACTTGATGAGCTCTCAAAATAG

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00269	128728	131550	+

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

molecular_function

GO:0005515 protein binding

GO:0016772 transferase activity, transferring phosphorus-containing groups

GO:0016773 phosphotransferase activity, alcohol group as acceptor

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000269s00013903.1	PF00240.18	ubiquitin	36	104	2.50E-10
Glyur000269s00013903.1	PF00454.22	PI3_PI4_kinase	284	548	1.00E-44

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	2.188
SRR1783600	control	2.266
SRR1783602	moderate drought stress	1.178
SRR1811619	moderate drought stress	1.173

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	2.830
DRR006520	Root Summer glycyrrhizin high producing strain	2.804
DRR006521	Root Winter glycyrrhizin high producing strain	0.000
DRR006522	Root Winter glycyrrhizin high producing strain	0.000
DRR006523	Root Summer glycyrrhizin low producing strain	1.340
DRR006524	Root Summer glycyrrhizin low producing strain	1.416
DRR006525	Leaf Summer glycyrrhizin high producing strain	0.506
DRR006526	Leaf Summer glycyrrhizin high producing strain	0.504

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	10.234
SRR2868004	Drought Stress (root)	5.585
SRR2967015	Control (root)	5.821

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	0.678
SRR9715740	Leaf	0.225
SRR9715741	Leaf	0.241
SRR9715739	Root	1.918
SRR9715742	Root	1.464
SRR9715743	Root	1.221

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	4.824
SRR8749028	MeJA induced 9h	4.315
SRR8749029	MeJA induced 9h	1.511
SRR8749030	Uninduced	0.213
SRR8749031	Uninduced	0.192
SRR8749032	Uninduced	0.262

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	4.783
SRR8400027	Control - Root	4.094