Gene detail

Gene detail information of Glyur000269s00013899

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT4G15110.1	0	cytochrome P450, family 97, subfamily B, polypeptide 3
NR	KHN35086.1	0	Cytochrome P450 97B2, chloroplastic [Glycine soja]
COG	YP_630524.1	1.00E-57	cytochrome P450 family protein [Myxococcus xanthus DK 1622]
Swissprot	tr\|O48921\|C97B2_SOYBN	0	Cytochrome P450 97B2, chloroplastic (Precursor)
trEMBL	tr\|V7CMU9\|V7CMU9_PHAVU	0	Uncharacterized protein {ECO:0000313\|EMBL:ESW30585.1}

Sequence

Transcript Sequence

>Glyur000269s00013899.1
CCCTCAATCTCATAGTCATATCCTAATCTAATTGGTGGGCTCGCGCTAAACAAACAGCACCCATATTCTATTCTAATGGTTATTTCCACATGCGTCACCGGTGAACCACCTAATTGGTGCATCACGCAAGACAGCACCCATATCCTAATGGTGACGTTCGCACTTTCCATCATCATCGGTACCTCTCTCCGCTAGTCTATTTTTATACCCAACTTGAACTCGGTGCGTGCAAGCACCACTCACTGTCACTGCTTAGTTAGCGCTTCCATTACAACACCGCCAGGCACCGCCAGGCACCGCCATCACTATCACTATGATTGCCGCTTTCTCAACCGTCACTGATACCAGTCTTCAGTACACCAGATTCGATTCTCGTTCCATGTCACTCAGCCTCAGCTTCCATTTCCCTCTTTCTGTTCACATTCGCTATTCTGAGCCCAAACGGTTTTCTTCTATCAGATGTCAATCAACTAATGCCGATAAGGGGAAATCAAGTAGAAACCTCCTGGACAACGCGAGCAACCTACTCACGAACTTGTTGAGTGGTGGAAGTATAGGGTCTATGCCCATAGCTGAAGGTGCGGTCTCAGATCTGTTTGGACGACCTCTGTTTTTCTCACTCTATGATTGGTTCTTAGAGCATGGCTCGGTGTATAAACTTGCGTTCGGGCCGAAAGCATTTGTTGTTGTATCAGATCCCATAGTTGCAAGACATATTCTAAGAGAAAATGCATTTTCTTATGACAAGGGAGTACTTGCTGATATCCTAGAACCAATAATGGGCAAAGGACTCATACCTGCAGACCTTGATACATGGAAGCAAAGGAGAAGAGTCATTGCTCCGGGTTTCCATACCTCATACTTGGAAGCTATGGTCAAAACATTCACTGCCTGTTCAGAAAGAACAATATCAAAATTCAATAAGCTTCTTGAAGGAGAGGGTCATGATGGACAGAAATCAATTGAATTGGACCTTGAAGCAGAGTTTTCAAATTTGGCTCTTGATATTATTGGGCTTGGTGTGTTCAACTATGACTTTGGTTCTGTCACCAAAGAATCTCCCGTTATTAAGGCTGTCTATGGCACTCTTTTTGAAGCCGAACATAGATCCACTTTCTATATTCCATATTGGAAAATTCCATTGGCAAGGTGGATAGTACCCAGGCAAAGGAAGTTTCAGGATGACCTTAAGATCATTAATACTTGTCTCGATGGACTTATNAAAAATGCAAAAGAGAGCAGGCAGGAAGCAGATGTTGAGAAACTGCAGCAAAGGGATTACGTAAATTTGAAGGATGCAAGTCTTCTGCGTTTCCTAGTTGATATGCGAGGAGTTGATGTTGATGATCGTCAGTTGAGGGATGATTTAATGACAATGCTTATTGCTGGTCATGAGACAACGGCTGCAGTTCTTACTTGGGCAGTTTTCCTGCTAGCTCAAAATCCTATCAAAATGAAGAAGGCTCAAGCAGAGGTAGATTTGGTGCTGGGTACGGGGAAGCCAACTTTTGAATCAATTAAAAAACTGCAGTACATTAGGTTAATTGTTGTGGAGTCTCTTCGTTTATATCCCCAACCACCTTTGTTGATTAGACGTGCACTCAAATCTGATGTTTTACCAGGAGGGCACAAAGGTGACAAAGATGGTTATGCAATACCTGCTGGGACTGACGTATATAATCTCCATCGATCTCCATATTTTTGGGACCGCCCTAATGACTTCGAACCAGAGAGATTTCTAGTGCAAAGCAAGAATGAAGAAATTGAAGGATGGGCTGGTTTTGACCCATCTCGAAGTCCTGGGGCCTTGTATCCAAACGAGATTATATCGGATTTTGCATTCTTGCCTTTTGGTGGCGGACCAAGAAAATGTGTGGGTGACCAATTTGCTCTCATGGAGTCCACTGTAGCGCTGACTATGCTGCTACAGAAGTTCGACGTGGAATTGAAGGGGACCCCGGAATCGGTCGAACTAGTTACCGGGGCAACCATCCACACCAAAAATGGATTGTGGTGCAATTTGAGGAAGAGATCTAATTTACATTGACATATTTACAGTGGAAATTTTTCTTATCCAGAATGATGTAA

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00269	114786	121453	-

Gene family

Gene family	subfamily
Cytochrome P450 Family	CYP97B3

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0055114 oxidation-reduction process

molecular_function

GO:0005506 iron ion binding

GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen

GO:0020037 heme binding

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000269s00013899.1	PF00067.17	p450	107	567	3.00E-74

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	5.862
SRR1783600	control	5.655
SRR1783602	moderate drought stress	5.584
SRR1811619	moderate drought stress	5.643

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	7.258
DRR006520	Root Summer glycyrrhizin high producing strain	7.340
DRR006521	Root Winter glycyrrhizin high producing strain	5.900
DRR006522	Root Winter glycyrrhizin high producing strain	5.635
DRR006523	Root Summer glycyrrhizin low producing strain	6.872
DRR006524	Root Summer glycyrrhizin low producing strain	6.943
DRR006525	Leaf Summer glycyrrhizin high producing strain	34.735
DRR006526	Leaf Summer glycyrrhizin high producing strain	34.099

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	14.275
SRR2868004	Drought Stress (root)	14.625
SRR2967015	Control (root)	14.120

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	15.966
SRR9715740	Leaf	28.578
SRR9715741	Leaf	16.487
SRR9715739	Root	7.501
SRR9715742	Root	9.834
SRR9715743	Root	6.540

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	5.497
SRR8749028	MeJA induced 9h	5.084
SRR8749029	MeJA induced 9h	3.048
SRR8749030	Uninduced	2.662
SRR8749031	Uninduced	0.920
SRR8749032	Uninduced	1.598

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	13.679
SRR8400027	Control - Root	13.419