Gene detail information of Glyur000268s00013381


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G59970.13.00E-41Histone superfamily protein
NRACG30677.18.72E-66histone H4 [Zea mays]
Swissprottr|P0CG89|H4_SOYBN7.00E-67Histone H4
trEMBLtr|Q5NSW2|Q5NSW2_FRAAN5.00E-65Histone H4 {ECO:0000256|RuleBase:RU000528} (Fragment)

Sequence

Transcript Sequence
Protein Sequence


Location information (JBrowse)

ScaffoldStartEndStrand
Scaffold00268129825130136+


Gene family

Gene familysubfamily
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KEGG pathway

KOEnzymeEnzyme IDpathwaymapID
----------


Gene Ontology

biological_process

GO:0006334  nucleosome assembly


cellular_component

GO:0000786  nucleosome

GO:0005634  nucleus


molecular_function

GO:0003677  DNA binding

GO:0046982  protein heterodimerization activity

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Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000268s00013381.1PF00125.19Histone28942.40E-14


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control48.726
SRR1783600control48.877
SRR1783602moderate drought stress58.964
SRR1811619moderate drought stress59.122

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain170.324
DRR006520Root Summer glycyrrhizin high producing strain171.953
DRR006521Root Winter glycyrrhizin high producing strain243.345
DRR006522Root Winter glycyrrhizin high producing strain237.523
DRR006523Root Summer glycyrrhizin low producing strain162.394
DRR006524Root Summer glycyrrhizin low producing strain162.169
DRR006525Leaf Summer glycyrrhizin high producing strain117.434
DRR006526Leaf Summer glycyrrhizin high producing strain116.069

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress (root)325.437
SRR2868004Drought Stress (root)183.979
SRR2967015Control (root)187.516

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leaf129.743
SRR9715740Leaf98.298
SRR9715741Leaf83.349
SRR9715739Root54.304
SRR9715742Root50.766
SRR9715743Root55.348

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h415.062
SRR8749028MeJA induced 9h208.107
SRR8749029MeJA induced 9h296.712
SRR8749030Uninduced71.610
SRR8749031Uninduced42.525
SRR8749032Uninduced43.735

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment - Root160.651
SRR8400027Control - Root180.734

© 2021 Resource Institute for Chinese & Ethnic Materia Medica, Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved