Gene detail

Gene detail information of Glyur000268s00013370

Functional Annotation

Database	Orthologs	Annotation
TAIR	AT3G45850.2	P-loop containing nucleoside triphosphate hydrolases superfamily protein
NR	KHN33430.1	125 kDa kinesin-related protein [Glycine soja]
Swissprot	tr\|O23826\|K125_TOBAC	125 kDa kinesin-related protein
trEMBL	tr\|K7M9J6\|K7M9J6_SOYBN	Kinesin-like protein {ECO:0000256\|RuleBase:RU000394}

Sequence

Transcript Sequence

>Glyur000268s00013370.1
CATTTCCATTTCCCCTCTTTATTTTCAATTTTCGCTATTTTTCGACTTGCTCAACTTTTTCTTCCAGCTTCCACCACAGAGACAACACTCACACTCACTCTTTCTCTCCTTCTCTGTCACTCTCAGTCACATATATCATATTAAAAACCATTAAATAAACTAACTCCAACTAATGCTTCTGTAACGAAATATCTCACTCGACGAATTAAATTCTCACTGCGAATTGCTATAACCTCTTATTCCACCGTCGCTGATTCTTTATTCTCATTGCCNTCACAAAAAAACAGCACAATGTAATTCTGTTCATACCGTTATTGAACGCCATTGGAATTGTTTTGGATTGTTCGGTGCAATGGAAACTCAGCAGAGAAGAGGAGGATTGGTGCCGTTGTCGCCGTCGCATACGCCGCGCTCCGGCGAAAAGCTGCGATCCATGGATTCTAATTCGACAAATTACAACAAGTATGATAAGGAAAAAGGCGTCAATGTGCAGGTCCATGTTCGTTGCAGGCCATTGAGCGAAGATGAAGCGAGAGTGCATACACCGGTTGTGATTTCGTGTAACGAAGGTAGAAGAGAGGTTTCGTCTGTACAGCATATAGCCAACAAGCAGATCGATAGAACCTTCACATTTGATAAGGTTTTTGGTCCTAACTCACAGCAGAAGGAACTGTATCAGCAGAATGGAGAATTTCCTAGCGACGCTGGTGTCATCCCAAGAGCTGTGGAACAGATTTTTCATATATTAGAAGTTCAGAATGCTGAGTATAGCTTGAAAGTAACATTTCTAGAACTTTACAACGAGGAGATAACAGATCTTTTGTCCCCTGAGGAGACTACAAAGTTTTTAGATGACAAATCTAAGAAGCCTATAGCTCTTATGGAGGATGGGAAGGGAGGTGTTTTTGTCAGAGGTTTAGAAGAAGAGATTGTTTGCACTGCAGATGAAATTTACAAGATATTGGAGAAGGGTTCTGCGAAAAGGCGAACAGCTGAGACTCTTCTTAACAAACAAAGCAGCCGCTCTCACTCCATATTCTCTATCACGATTCATATTAAGGAGTGCACTNCAGAGGGTGAAGAGATGATTAAATGTGGGAAGCTAAATCTTGTGGACCTCGCAGGCTCTGAGAACATTTCACGTTCTGGTGCTAGAGAGGGTAGAGCAAGGGAAGCNGGGGAGATAAATAAAAGCTTGCTTACACTAGGTCGAGTGATTAATGCTCTAGTTGAGCACTCAGGTCATGTTCCTTATAGGGATAGCAAATTAACAAGACTGTTAAGAGATTCCTTGGGTGGTAAAACCAAGACATGCATTATTGCCACAATATCGCCTTCCATTCACAGTCTGGAGGAAACTCTTAGTACCTTGGATTATGCACACCGTGCCAAAAATATCAAGAACAAACCAGAGATCAATCAGAAGATGGTGAAAAGTGCACTCATTAAGGATTTGTATTCTGAAATTGACAGACTGAAGCAAGAGTTATATGTGGCAAGAGAGAAGAATGGAATCTATATACCACGTGATCGCTATGTTAATGAGGAAGCAGATAAGAAGGCCATGGCTGAAAAGATAGAATGCATGGAACTAGAAGGAGAGTCTAAGGATAAGCAACTGATGGAACTACAAGAACTCTACAATTGTCAGCAACTTTTGACTACTGAATTAAGTGATAAACTAGAACAAACTGAGAAAAGTCTAGAAGAAACTGAGAGGACATTATTCGATCTTGAGGAAAGGCACAAACAAGCAAATGCAACAATTAAGGAAAAGGAATTTCTAATATCAAATCTACTGAAATCTGAACTTTGTGTTTTGTGTGATTTTTCTCTATTCTTGCTTTTTCCAGAAAAAGCACTTGTAGAACATGCAATTGAGTTACGAGCAGAGCTTGAGAATGCTGTATCCGATGTGTCAAACCTGTTTTCTAAAATTGAGCGGAAGGATAAAATTGAAGAAGGAAATAGAATACTCATCCAGAAATTCCAGTCTCAGTTAGCCAAACAGCTTGAAGATTTGCACATGACAGTTGCAGCATCTGCAATGCAACAAGAGCAGCAACTGAAGGAAATGGAGGAAGACATGTACTCTTTTGTATCAACAAAGGCAGAGGCTACTGAAGATCTTAGAGTACGGGTAGGAAATTTAAAAAACATGTATGGTTCTGGCATAGATGCTTTGGATAATTTAGCTAAGGAGCTTAAAGGAAATAATCAGTTAATTTTTGAAGACTTGAATTCTGAAGTAGCCAAGCATTCATCTGCCTTGGAGGATCTTTTTAAAGGAATAGCCTTAGAAGCTGATTCATTACTAAATGATCTTCAAAGTAGTCTCCACATGCAAGAGGCCAAGTTAACTGCATATGCTCATCAACAACGAGAGGCACATGCCAGAGCAGTGGAGACTACACGAGCAGTATCTAAAATAACTGTGAACTTCTTTGAGACATTAGACATGCATGCATCCAATCTGATACAAATTGTGGAAGAAGCACAATTTGCCAATGATAAGAAATTATGTGACCTTCAAAAGAAATTTGAGGAGTGTACTGCACATGAAGAAAAGCAACTGTTGGAAAAAGTGGCAGTAATGTTAGCAAGCTCAAATGCTAGAAAGAACAAATTGGTTCAAATGGAAGTTAATGATCTTCGGGAGAGTACAAACAGTAAAATCAGTAAGTTGCGTCAAGAAACATTAATCATGCAAGATTCCATTTCTTCTGTTAAAGAAGACTGGAGAGTTCATATGGAAAAAACAGAATCCAACTATAATGAGGATACTTCTGCCGTAGAATCTGGAAAGAACGACCTTGTGGAGGTTCTTCAGGACTGTCTCAACAAGGCAGAAGCAGATTCGTTGCAACTTGATCATGAAGCATGTGGGAATCTGAACTCCATGATTATCCCGTGCNGTGGTGACTTGAGAGAATTGANGGGGGGTCATTATCACAGAATTGTAGAGATAACTGAAAATGCAGGGAANTGTCTTCTCAATGAATACGTGGTAGAAGAACCATCGTGTTCAACACCAAGAAAGAGACCATTCAATATACCCAGTGTTTCATCNATAGAAGAGCTAAGAGCCCCATCTTTTGAGGAACTGCTGAAGTCCTTCTCGGATGCCAAATCTCCAAAACATGCAAATGGTGATGTTAAATACATTGGGAATGGGACATATGAAGCTGCTCAATCCGTAAATGATACCCGAGTTCCTATTGTAACTTATTGCATTTAACTACTGTTCAAATGTAATTCTATACAAGTGACATTCATTTTTTTGGAAATAAAGCAAA

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00268	95095	101689	-

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0007018 microtubule-based movement

cellular_component
GO:0005871 kinesin complex

molecular_function

GO:0003777 microtubule motor activity

GO:0005524 ATP binding

GO:0008017 microtubule binding

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000268s00013370.1	PF00225.18	Kinesin	116	349	2.50E-85

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	1.381
SRR1783600	control	1.513
SRR1783602	moderate drought stress	2.039
SRR1811619	moderate drought stress	2.053

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	2.611
DRR006520	Root Summer glycyrrhizin high producing strain	2.527
DRR006521	Root Winter glycyrrhizin high producing strain	5.388
DRR006522	Root Winter glycyrrhizin high producing strain	5.218
DRR006523	Root Summer glycyrrhizin low producing strain	1.949
DRR006524	Root Summer glycyrrhizin low producing strain	1.836
DRR006525	Leaf Summer glycyrrhizin high producing strain	3.101
DRR006526	Leaf Summer glycyrrhizin high producing strain	3.179

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	1.055
SRR2868004	Drought Stress (root)	0.468
SRR2967015	Control (root)	0.713

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	1.041
SRR9715740	Leaf	2.400
SRR9715741	Leaf	0.927
SRR9715739	Root	0.052
SRR9715742	Root	0.101
SRR9715743	Root	0.086

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	0.124
SRR8749028	MeJA induced 9h	0.145
SRR8749029	MeJA induced 9h	0.014
SRR8749030	Uninduced	0.047
SRR8749031	Uninduced	0.000
SRR8749032	Uninduced	0.005

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	1.720
SRR8400027	Control - Root	2.340