Gene detail information of Glyur000267s00016689 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G25670.2 | 2.00E-16 | |
| NR | NP_001239664.1 | 2.40E-76 | uncharacterized protein LOC100788744 [Glycine max] |
| trEMBL | tr|C6TJF3|C6TJF3_SOYBN | 9.00E-77 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA17G12960.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00267 | 203917 | 207224 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 63.921 |
| SRR1783600 | control | 63.925 |
| SRR1783602 | moderate drought stress | 80.518 |
| SRR1811619 | moderate drought stress | 79.950 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 89.529 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 88.750 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 101.468 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 98.680 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 143.408 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 144.369 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 53.892 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 53.713 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 82.835 |
| SRR2868004 | Drought Stress (root) | 81.440 |
| SRR2967015 | Control (root) | 90.229 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 145.560 |
| SRR9715740 | Leaf | 117.892 |
| SRR9715741 | Leaf | 123.603 |
| SRR9715739 | Root | 96.947 |
| SRR9715742 | Root | 180.929 |
| SRR9715743 | Root | 174.377 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 181.542 |
| SRR8749028 | MeJA induced 9h | 168.755 |
| SRR8749029 | MeJA induced 9h | 219.617 |
| SRR8749030 | Uninduced | 426.426 |
| SRR8749031 | Uninduced | 166.237 |
| SRR8749032 | Uninduced | 138.888 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 68.975 |
| SRR8400027 | Control - Root | 59.439 |