Gene detail information of Glyur000266s00012637 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | XP_006586177.1 | 3.31E-30 | PREDICTED: vacuolar cation/proton exchanger 5-like isoform X5 [Glycine max] |
| trEMBL | tr|K7LAG5|K7LAG5_SOYBN | 7.00E-31 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA08G44921.7} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00266 | 148371 | 151827 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.444 |
| SRR1783600 | control | 1.462 |
| SRR1783602 | moderate drought stress | 1.294 |
| SRR1811619 | moderate drought stress | 1.231 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.715 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.760 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.138 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1.558 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.987 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.933 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.652 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.069 |
| SRR2868004 | Drought Stress (root) | 0.040 |
| SRR2967015 | Control (root) | 0.021 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1.369 |
| SRR9715740 | Leaf | 0.850 |
| SRR9715741 | Leaf | 0.893 |
| SRR9715739 | Root | 0.248 |
| SRR9715742 | Root | 0.915 |
| SRR9715743 | Root | 0.734 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 1.558 |
| SRR8749028 | MeJA induced 9h | 11.335 |
| SRR8749029 | MeJA induced 9h | 0.761 |
| SRR8749030 | Uninduced | 1.858 |
| SRR8749031 | Uninduced | 0.297 |
| SRR8749032 | Uninduced | 0.383 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 2.406 |
| SRR8400027 | Control - Root | 3.151 |