Gene detail information of Glyur000266s00012615 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G04040.1 | 1.00E-71 | HAD superfamily, subfamily IIIB acid phosphatase |
| NR | KEH42677.1 | 4.27E-159 | plant acid phosphatase [Medicago truncatula] |
| COG | YP_005845138.1 | 1.00E-21 | Class B acid phosphatase [Ignavibacterium album JCM 16511] |
| Swissprot | tr|P15490|VSPA_SOYBN | 9.00E-58 | Stem 28 kDa glycoprotein (Precursor) |
| trEMBL | tr|A0A072VLF9|A0A072VLF9_MEDTR | 2.00E-159 | Plant acid phosphatase {ECO:0000313|EMBL:KEH42677.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00266 | 41582 | 42589 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000266s00012615.1 | PF03767.9 | Acid_phosphat_B | 38 | 254 | 3.30E-60 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.577 |
| SRR1783600 | control | 1.442 |
| SRR1783602 | moderate drought stress | 0.397 |
| SRR1811619 | moderate drought stress | 0.378 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 2.662 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 2.825 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.286 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.283 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.241 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.236 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 36.532 |
| SRR2868004 | Drought Stress (root) | 10.316 |
| SRR2967015 | Control (root) | 10.855 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.287 |
| SRR9715740 | Leaf | 0.071 |
| SRR9715741 | Leaf | 0.261 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.081 |
| SRR9715743 | Root | 0.080 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 1.278 |
| SRR8749028 | MeJA induced 9h | 0.174 |
| SRR8749029 | MeJA induced 9h | 2.976 |
| SRR8749030 | Uninduced | 1.506 |
| SRR8749031 | Uninduced | 13.879 |
| SRR8749032 | Uninduced | 16.894 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 2.874 |
| SRR8400027 | Control - Root | 3.273 |