Gene detail

Gene detail information of Glyur000265s00020617.1

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT5G15730.1	3.00E-139	Protein kinase superfamily protein
NR	XP_003555013.1	0	PREDICTED: probable leucine-rich repeat receptor-like serine/threonine-protein kinase At5g15730-like [Glycine max]
COG	YP_007162414.1	1.00E-23	serine/threonine protein kinase [Cyanobacterium aponinum PCC 10605]
Swissprot	tr\|Q9LFV3\|Y5157_ARATH	2.00E-173	Probable leucine-rich repeat receptor-like serine/threonine-protein kinase At5g15730
trEMBL	tr\|I1N6G8\|I1N6G8_SOYBN	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA19G04870.1}

Sequence

Transcript Sequence

>Glyur000265s00020617.1
AGTGGGCNTCTGTTATGTAGTACTAGTCTTCTGCAAGATGATTTCATTGTTTGATTATCAAGAGCGATTGAAGAATGGTTCGTCAAACTAATTTAGTTATCATTGGTGTCTCTGCTGGTTTGGCCCTTGGAATTCTGATTTCTTGCCTCATATTTTTCGGCATAAGGTGGTACAAGAANCGTTCTCATCTTAGTCGATCTGCTAGTGAGCCTAGTGTAACGACTCTTCCAATACGAACAAATGGATTGGGAACAAGTACAGACTTCAGTGCATCTCTCTCTAGTTCCGTNGCCACGTCGATGTCAGAAAATGTACAGAATAATTCCCATTTCNCTTGGTGGAATCATAAAAGAAAAGATCGGTTTGCTTCAGCATCAGGCATTCTAAAGTATTCATACAAAGAACTTCAAAAGGCCACACAAAATTTCACGACTATCTTGGGACAAGGATCATATGGCACGGTTTATAAAGCCACAATGCCTACAGGAGAAGTGGTAGCTGCAAAGGTGCTTGCACCCAATTCCAAACAAGGGGAGAAAGAATTCCAAACAGAGGTGTTTCTGCTAGGAAGACTGCATCACCGGAATCTTGTGAATTTGGTTGGATATTGTGTAGATAAAGGACAGCGCATATTGGTNTATCAGTTCATGAGTAATGGAAGTTTAGCAAGTGAAGAAAAGGAGTTGAGTTGGGATGAAAGGCTGCAAATTGCTATTGATATTTCACACGGAATAGAATATCTTCATGAAGGAGCAGTCCCGCCCGTNATACATCGCGATTTGAAATCCGCCAACATATTGCTAGATCACTCCATGAGAGCTAAGGTTGCTGATTTTGGGCTCTCGAAGGAAGAGATCTTCGATGGCCGGAATTCTGGTCTTAAGGGTACATATGGTTACATGGACCCGGCATACATTTCCACAAGCAGGTTAACAACCAAGAGTGACATATACAGTTTTGGTATCATACTTTTTGAGCTCATCACTGCCATCCACCCACATCAAAATTTGATGGAATATATTAACCTTGCTGCAATGGACCATGATGGTATAGATGGGATACTTGACAAGCAACTTGTGGGGAAATGCAACATTGGAGAAGTGAGGCAGCTTACTAAAGTTGCACACAAATGCTTGCACAAATCACCAAAGAAACGACCCTCTATAAGTGAAGTTTCACAGGGAATATCAAGGATAAAGCAAAGGAGACTTCGNCATGTGATGGAAGATAACTTTTCATTTGCAAGCAATAACTTCTCTAGAGCTGTGAGTCGATTAGAAGATCGACAGGTTGAATTAAGTAGGATAGCTTCCAGGAACATCAAAGAAACTGTATGAACACAATTATTACTCCTATATAGGGTGAGTCCAAAAAACATAACAAAAAAATCAAATCTTTGTAGTCCACTGGGGACCAAGGAGGTTTATAACTAATCTAATGAAAATCACTACTACAAAAA

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00265	108137	111841	-

Gene family

Gene family	subfamily
Protein Kinases Family	PPC:1.3.3

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0006468 protein phosphorylation

molecular_function

GO:0004672 protein kinase activity

GO:0005524 ATP binding

GO:0016772 transferase activity, transferring phosphorus-containing groups

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000265s00020617.1	PF00069.20	Pkinase	119	369	1.80E-49

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	22.363
SRR1783600	control	22.127
SRR1783602	moderate drought stress	19.101
SRR1811619	moderate drought stress	18.845

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	25.330
DRR006520	Root Summer glycyrrhizin high producing strain	25.323
DRR006521	Root Winter glycyrrhizin high producing strain	17.734
DRR006522	Root Winter glycyrrhizin high producing strain	17.323
DRR006523	Root Summer glycyrrhizin low producing strain	35.178
DRR006524	Root Summer glycyrrhizin low producing strain	35.186
DRR006525	Leaf Summer glycyrrhizin high producing strain	12.756
DRR006526	Leaf Summer glycyrrhizin high producing strain	12.719

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	30.568
SRR2868004	Drought Stress (root)	38.693
SRR2967015	Control (root)	32.715

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	14.357
SRR9715740	Leaf	13.242
SRR9715741	Leaf	17.296
SRR9715739	Root	2.163
SRR9715742	Root	11.443
SRR9715743	Root	9.263

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	15.878
SRR8749028	MeJA induced 9h	22.512
SRR8749029	MeJA induced 9h	14.022
SRR8749030	Uninduced	32.058
SRR8749031	Uninduced	23.820
SRR8749032	Uninduced	10.228

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	36.577
SRR8400027	Control - Root	42.689