Gene detail information of Glyur000264s00019968 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G00440.2 | 9.00E-93 | Protein of unknown function (DUF3741) |
| NR | XP_004492734.1 | 0 | PREDICTED: uncharacterized protein LOC101504997 isoform X1 [Cicer arietinum] |
| trEMBL | tr|Q2HTJ8|Q2HTJ8_MEDTR | 0 | Phosphatidylinositol N-acetyglucosaminlytransferase subunit P-like protein {ECO:0000313|EMBL:AES80185.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00264 | 116605 | 122494 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000264s00019968.1 | PF12552.3 | DUF3741 | 221 | 266 | 4.60E-15 |
| Glyur000264s00019968.1 | PF14309.1 | DUF4378 | 760 | 907 | 7.20E-30 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 15.055 |
| SRR1783600 | control | 15.250 |
| SRR1783602 | moderate drought stress | 25.508 |
| SRR1811619 | moderate drought stress | 25.396 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 25.557 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 25.277 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 19.366 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 18.956 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 36.370 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 36.379 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 9.876 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 9.830 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 25.385 |
| SRR2868004 | Drought Stress (root) | 39.066 |
| SRR2967015 | Control (root) | 31.047 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 7.168 |
| SRR9715740 | Leaf | 3.918 |
| SRR9715741 | Leaf | 5.932 |
| SRR9715739 | Root | 3.219 |
| SRR9715742 | Root | 24.463 |
| SRR9715743 | Root | 21.139 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 8.633 |
| SRR8749028 | MeJA induced 9h | 20.112 |
| SRR8749029 | MeJA induced 9h | 14.909 |
| SRR8749030 | Uninduced | 9.671 |
| SRR8749031 | Uninduced | 17.654 |
| SRR8749032 | Uninduced | 12.153 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 33.686 |
| SRR8400027 | Control - Root | 32.190 |