Gene detail information of Glyur000264s00019964 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G00370.1 | 0 | Major facilitator superfamily protein |
| NR | XP_003556597.1 | 0 | PREDICTED: probable anion transporter 2, chloroplastic-like isoform X1 [Glycine max] |
| COG | YP_003588376.1 | 1.00E-59 | major facilitator superfamily protein [Kyrpidia tusciae DSM 2912] |
| Swissprot | tr|Q8GX78|ANTR2_ARATH | 0 | Probable anion transporter 2, chloroplastic (Precursor) |
| trEMBL | tr|K7N0J0|K7N0J0_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA20G00410.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00264 | 56023 | 60964 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000264s00019964.1 | PF07690.11 | MFS_1 | 155 | 513 | 7.20E-60 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 4.447 |
| SRR1783600 | control | 4.353 |
| SRR1783602 | moderate drought stress | 3.885 |
| SRR1811619 | moderate drought stress | 3.702 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 3.387 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 3.310 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1.379 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1.327 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 3.072 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 2.907 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 16.793 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 16.806 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 3.544 |
| SRR2868004 | Drought Stress (root) | 2.411 |
| SRR2967015 | Control (root) | 0.721 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 37.154 |
| SRR9715740 | Leaf | 64.159 |
| SRR9715741 | Leaf | 29.007 |
| SRR9715739 | Root | 2.148 |
| SRR9715742 | Root | 4.153 |
| SRR9715743 | Root | 4.307 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 2.155 |
| SRR8749028 | MeJA induced 9h | 1.653 |
| SRR8749029 | MeJA induced 9h | 1.069 |
| SRR8749030 | Uninduced | 0.178 |
| SRR8749031 | Uninduced | 0.005 |
| SRR8749032 | Uninduced | 0.158 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 12.502 |
| SRR8400027 | Control - Root | 10.315 |