Gene detail information of Glyur000264s00019958 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G45990.2 | 1.00E-124 | |
| NR | XP_004492754.1 | 0 | PREDICTED: uncharacterized protein LOC101510342 isoform X1 [Cicer arietinum] |
| COG | YP_007068321.1 | 2.00E-46 | hypothetical protein Cal7507_5146 [Calothrix sp. PCC 7507] |
| trEMBL | tr|C6TN79|C6TN79_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA18G46830.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00264 | 45177 | 48370 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 6.992 |
| SRR1783600 | control | 7.045 |
| SRR1783602 | moderate drought stress | 7.006 |
| SRR1811619 | moderate drought stress | 7.140 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 13.825 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 13.517 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 10.553 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 10.297 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 8.943 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 8.828 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 38.530 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 38.889 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 28.931 |
| SRR2868004 | Drought Stress (root) | 30.540 |
| SRR2967015 | Control (root) | 30.978 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 50.143 |
| SRR9715740 | Leaf | 56.256 |
| SRR9715741 | Leaf | 53.235 |
| SRR9715739 | Root | 2.964 |
| SRR9715742 | Root | 9.653 |
| SRR9715743 | Root | 8.777 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 20.457 |
| SRR8749028 | MeJA induced 9h | 23.717 |
| SRR8749029 | MeJA induced 9h | 21.377 |
| SRR8749030 | Uninduced | 27.353 |
| SRR8749031 | Uninduced | 14.351 |
| SRR8749032 | Uninduced | 10.712 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 26.269 |
| SRR8400027 | Control - Root | 27.576 |