Gene detail information of Glyur000263s00013586 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G34190.1 | 6.00E-24 | stress enhanced protein 1 |
| NR | AFK36210.1 | 2.24E-74 | unknown [Lotus japonicus] |
| Swissprot | tr|Q9M7I9|STEP1_ARATH | 7.00E-46 | Stress enhanced protein 1, chloroplastic (Precursor) |
| trEMBL | tr|I3S7G8|I3S7G8_LOTJA | 8.00E-75 | Uncharacterized protein {ECO:0000313|EMBL:AFK36210.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00263 | 160975 | 163690 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 5.177 |
| SRR1783600 | control | 5.209 |
| SRR1783602 | moderate drought stress | 5.615 |
| SRR1811619 | moderate drought stress | 5.536 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 10.292 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 10.179 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 10.254 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 9.826 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 13.231 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 14.089 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 181.188 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 180.596 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 13.319 |
| SRR2868004 | Drought Stress (root) | 13.502 |
| SRR2967015 | Control (root) | 10.897 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 233.660 |
| SRR9715740 | Leaf | 364.957 |
| SRR9715741 | Leaf | 171.755 |
| SRR9715739 | Root | 12.588 |
| SRR9715742 | Root | 8.561 |
| SRR9715743 | Root | 9.789 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 9.379 |
| SRR8749028 | MeJA induced 9h | 6.255 |
| SRR8749029 | MeJA induced 9h | 8.083 |
| SRR8749030 | Uninduced | 5.090 |
| SRR8749031 | Uninduced | 1.596 |
| SRR8749032 | Uninduced | 5.742 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 18.407 |
| SRR8400027 | Control - Root | 15.338 |