Gene detail information of Glyur000263s00013567 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G22990.1 | 1.00E-50 | Heavy metal transport/detoxification superfamily protein |
| NR | XP_003536626.1 | 4.73E-99 | PREDICTED: heavy metal-associated isoprenylated plant protein 26-like [Glycine max] |
| Swissprot | tr|Q9SZN7|HIP26_ARATH | 6.00E-49 | Heavy metal-associated isoprenylated plant protein 26 (Precursor) |
| trEMBL | tr|I1LEL3|I1LEL3_SOYBN | 2.00E-99 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA10G41040.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00263 | 66737 | 67939 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000263s00013567.1 | PF00403.21 | HMA | 29 | 83 | 2.00E-13 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.177 |
| SRR1783600 | control | 1.329 |
| SRR1783602 | moderate drought stress | 0.859 |
| SRR1811619 | moderate drought stress | 0.652 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 3.208 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 3.119 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 7.053 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 7.814 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 5.115 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 5.426 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 19.190 |
| SRR2868004 | Drought Stress (root) | 20.708 |
| SRR2967015 | Control (root) | 59.582 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 3.124 |
| SRR9715740 | Leaf | 6.050 |
| SRR9715741 | Leaf | 5.045 |
| SRR9715739 | Root | 1.331 |
| SRR9715742 | Root | 1.338 |
| SRR9715743 | Root | 1.002 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.458 |
| SRR8749028 | MeJA induced 9h | 0.036 |
| SRR8749029 | MeJA induced 9h | 0.426 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.031 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 6.007 |
| SRR8400027 | Control - Root | 5.287 |