Gene detail

Gene detail information of Glyur000263s00013556

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT2G01320.2	0	ABC-2 type transporter family protein
NR	XP_003536632.1	0	PREDICTED: ABC transporter G family member 7-like [Glycine max]
COG	YP_008149444.1	2.00E-40	hypothetical protein SCE1572_15050 [Sorangium cellulosum So0157-2]
Swissprot	tr\|Q9ZU35\|AB7G_ARATH	0	ABC transporter G family member 7
trEMBL	tr\|I1LEM3\|I1LEM3_SOYBN	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA10G41110.1}

Sequence

Transcript Sequence

>Glyur000263s00013556.1
GAGACGGAAGAGCGTAGTAGACGATAACGATAATGGGTGGTTTTGGCGGGAAAAAGGTGCACCAAATGGTCGCCGGCTTCGGCGGCAGTGGCCTCGGTCAGGTAGTCATCGCCGTCGCTGTATCCTTCCTCGTTCGCATCTTCTCCACCCCCGGCCCCGCCCTCTTGCCGGATAACGACGACGACGATGACGCGCCGAACAACGGTGAAGCTCCTCCGCCCTCCGGAAAGGTCACGCCGGTCACAATCCGCTGGAACAACATCAATTGCTCCCTTTCTGATAAATCTTCCANGTCCGAGAGGTTTTTGCTTAAAAATGTGAGCGGAGAAGCAAAGCCTGGAAGATTATTAGCGATAATGGGGCCTTCCGGTTCGGGGAAGACAACATTGCTTAATGTTCTTGCGGGTCAGCTGGCAGCGTCGCCCAGGCTGCACTTGAGTGGCCTTCTTGAGTTCAATGGAAAGCCTGGTTCCAACAACACTTACAAGTTTGCTTATGTGAGGCAGGAGGATCTCTTTTTCTCACAGCTTACTGTGANGGAAACATTGTCTCTTGCTACAGAACTCCAGCTTCCCCACANATCTTCCGAGGAAGAGAGAGACGAATTTGTGAACAATCTCCTTTTTAAAATAGGCTTGGTCAGTTGTGCTGATACCAATGTTGGTGATGCAAAAGTTCGTGGAATTAGTGGCGGTGAAAAGAAACGCTTATCCTTGGCATGTGAACTGCTTGCAAGCCCATCTGTTATATTTGCTGATGAACCCACAACAGGACTTGATGCCTTCCAGGCTGAGAAAGTTATGGAAACTCTCCAACAACTTGCACAAGATGGTCATACTGTAATCTGCTCAATACATCAGCCAAGAGGTTCAGTGTATAGCAAATTCGATGACATTGTCTTGCTAACTGAGGGTTCACTTGTTTATGCTGGTCCTGCTCGTGATGAACCATTGGCATACTTCTCAAAATTCGGGTACCACTGCCCAGATCATGTAAATCCTGCTGAATTTTTGGCCGATCTTATATCCATAGACTATGGCTCTGCTGATAGTGTCTATTCCTCTCAAAAAAGGATTGATGGGCTTGTTGAGTCATTCTCACAAAGACTATCNACAGTAATATATGCAACTCCAATTACTTTAGATGATCTCTCAAAAAATAGAAAGAAAATCAGCAAGAGGACTGTAACAAAGAAGAAAGGGGGCTGGTGGAAGCAATTTTGGTTGCTTCTTAAACGAGCATGGATGCAGGCTTCCCGTGATGCACCTACCAACAAAGTTAGGGCAAGGATGTCAATTGCATCAGCAATTATCTTTGGGTCAGTTTTTTGGAGAATGGGAAAATCGCAGACTTCAATACAAGACAGAATGGGATTGCTTCAGGTTACTGCNATAAACACAGCTATGGCTGCTCTCACAAAGACCGTTGGTGTGTTTCCGAAAGAACGGGCAATTGTTGATAGAGAANGTGCTAAAGGCTCCTATTCCTTGGGTCCCTATCTGTTTTCGAAATTGTTGGCTGAGATTCCAATTGGAGCAGCATTTCCATTAATGTTTGGTACTGTTTTGTACCCAATNGCACGTCTTCATCCTACTTTGATGAGATTTGGGAAATTCTGTGGAATCGTCACTATGGAATCTTTTGCTGCATCCGCGATGGGTCTTACTGTTGGTGCTATGGTTCCAACCACTGAAGCAGCAATGGCAGTAGGCCCCTCTCTTATGACAGTTTTCATNGTATTTGGTGGCTACTATGTCAATCCTGAGAATACCCCAATCATCTTCCGCTGGCTTCCTAGTGTTTCTCTGATTAGATGGGCTTTTCAAGGACTTTGCATTAATGAATTTAGTGGTCTTCAATTTGATCATCAGCATTCATTTGATGTTCAAACTGGAGAACAGGCACTAGAGCGTATTTCCTTTGGAAGAAGTAGGATTAGGGATACGGTGGTAGCGCAAAATAGAATATTGTTATTCTGGTATTGCACCACCTACCTTCTCCTTGAGAAAAACAAGCCCAAATACCAGCAACTTGAAACAACCCCTCCTGACCACGACAAACCACATTTAAAGCTTGAGGAGTTCAATTCTGAACAAGTTGATGAGACACCTGAAGCACCACCGGTCAGGCAAGCTGGTTCCAACCAGCCCCTTGAGTTACCTGATCCTGAAGTAGATCTTGTTGGCCCTTTTGCCCTAGAAGGAAACAAATCCAACGTGGTGATGTGAGAAAGACAAGAAGATTCTTGGCGTGAGAAACATTCATATTGATCGACACGCTATGTCCAATTCAAAATATATATGCTGTGACGTGTTCCGCAATCTCTCTGTCTTGGAATTCAGCTCTGTTTTATTTACTCCTTAACTTTTACGCCCCAACTCCCACTCCACCGTCATTTGATTTCCTTACCCTGTAAGTGNGTGTGTGTAACAACAGAACACACGCACAAGCACAACCATGTTGTTAGTGTTATATATACGCACAAGGCACAACGTGCTCATCCCCATAATTCAACACCAATACATACCTTGGCTTCCAATCACAAATTGCTTCTCAAAAGCTACCTGTTGCTTGCAAGTACCCTTCATCACTTTGATTAATTTGAATCCTTTAATTTCAAGTCCAAGAAAATGCACGCAAGTGCAACATCTCTATGCTCACTTCCCTCAGGCAATTTGTTGCGGCGAAGTGCACCTTTTATTTCACACAAGAGTTGCTATATCTCTGCATCAAAAGGAGATGCATTTGGGCAACACTATGATGGGAAGTTGGTGGATGAGAGCATGATCCTTCTTAGAATGCGAATCCGTGAGATTGAGATGGTGGAAATGAACAAGAGTACTAAAGGAGGAGCTCCTTCTGGTTGGACTGAATGGGAGAAGAAGTACTTTGCGAATTATGGTTNGGATGTATGCGATGCAGTGGGAATGTTGCAGAGAGTGTTGATGAACACTAGACCTGCCTTGGCCGTGCCCATGCTGGCTCTCCTTATGATAACCATGTCAATGTCCATGTCTCTAGGTGTCTTTCATATGGTGGAGTTGACTAAAGGAATCATATAATACNTACCTGAAGAAGATCGAATGGGAAGAACCGAACCGAATTATTTGTACTAAACATTTTTGCATAGGTGTCATGGTCTATAGTGCGTCACAAATGTTATTCATCCT

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00263	12609	20470	-

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

cellular_component
GO:0016020 membrane

molecular_function

GO:0005524 ATP binding

GO:0016887 ATPase activity

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000263s00013556.1	PF00005.22	ABC_tran	93	245	5.70E-23
Glyur000263s00013556.1	PF01061.19	ABC2_membrane	395	605	3.10E-39

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	8.326
SRR1783600	control	8.405
SRR1783602	moderate drought stress	19.369
SRR1811619	moderate drought stress	19.392

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	13.282
DRR006520	Root Summer glycyrrhizin high producing strain	12.720
DRR006521	Root Winter glycyrrhizin high producing strain	39.261
DRR006522	Root Winter glycyrrhizin high producing strain	38.979
DRR006523	Root Summer glycyrrhizin low producing strain	18.673
DRR006524	Root Summer glycyrrhizin low producing strain	18.818
DRR006525	Leaf Summer glycyrrhizin high producing strain	59.923
DRR006526	Leaf Summer glycyrrhizin high producing strain	60.520

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	8.398
SRR2868004	Drought Stress (root)	8.424
SRR2967015	Control (root)	10.523

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	54.588
SRR9715740	Leaf	62.954
SRR9715741	Leaf	67.347
SRR9715739	Root	10.107
SRR9715742	Root	17.387
SRR9715743	Root	15.745

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	47.575
SRR8749028	MeJA induced 9h	80.395
SRR8749029	MeJA induced 9h	97.807
SRR8749030	Uninduced	28.305
SRR8749031	Uninduced	40.009
SRR8749032	Uninduced	53.696

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	11.694
SRR8400027	Control - Root	10.449