Gene detail information of Glyur000263s00013553 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G01300.1 | 9.00E-27 | |
| NR | NP_001239990.1 | 4.57E-61 | uncharacterized protein LOC100789312 [Glycine max] |
| trEMBL | tr|C6TFT5|C6TFT5_SOYBN | 2.00E-61 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA10G41130.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00263 | 5492 | 5943 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.601 |
| SRR1783600 | control | 0.671 |
| SRR1783602 | moderate drought stress | 0.925 |
| SRR1811619 | moderate drought stress | 0.944 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 81.751 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 82.014 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 29.136 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 29.866 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 193.026 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 205.825 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 10.594 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 10.687 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 10.185 |
| SRR2868004 | Drought Stress (root) | 20.232 |
| SRR2967015 | Control (root) | 42.496 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 33.590 |
| SRR9715740 | Leaf | 11.489 |
| SRR9715741 | Leaf | 40.251 |
| SRR9715739 | Root | 7.937 |
| SRR9715742 | Root | 27.622 |
| SRR9715743 | Root | 27.103 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 181.117 |
| SRR8749028 | MeJA induced 9h | 194.082 |
| SRR8749029 | MeJA induced 9h | 266.564 |
| SRR8749030 | Uninduced | 472.070 |
| SRR8749031 | Uninduced | 552.838 |
| SRR8749032 | Uninduced | 412.156 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 1.530 |
| SRR8400027 | Control - Root | 2.757 |