Gene detail information of Glyur000262s00020221 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G36020.1 | 6.00E-45 | HVA22-like protein J |
| NR | XP_004497678.1 | 6.81E-97 | PREDICTED: HVA22-like protein j-like [Cicer arietinum] |
| Swissprot | tr|Q8GXE9|HA22J_ARATH | 1.00E-54 | HVA22-like protein j |
| trEMBL | tr|K7LHZ7|K7LHZ7_SOYBN | 2.00E-89 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA10G09368.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00262 | 208272 | 211801 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000262s00020221.1 | PF03134.14 | TB2_DP1_HVA22 | 7 | 93 | 2.20E-28 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.799 |
| SRR1783600 | control | 0.843 |
| SRR1783602 | moderate drought stress | 0.781 |
| SRR1811619 | moderate drought stress | 0.751 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 1.528 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 2.065 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 2.464 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 2.765 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 3.378 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 2.951 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 3.938 |
| SRR2868004 | Drought Stress (root) | 3.360 |
| SRR2967015 | Control (root) | 3.814 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 5.294 |
| SRR9715740 | Leaf | 8.674 |
| SRR9715741 | Leaf | 6.819 |
| SRR9715739 | Root | 0.109 |
| SRR9715742 | Root | 1.827 |
| SRR9715743 | Root | 1.709 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.350 |
| SRR8749029 | MeJA induced 9h | 0.079 |
| SRR8749030 | Uninduced | 0.249 |
| SRR8749031 | Uninduced | 0.144 |
| SRR8749032 | Uninduced | 0.297 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 1.482 |
| SRR8400027 | Control - Root | 1.637 |