Gene detail information of Glyur000262s00020205 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G27890.1 | 5.00E-64 | NADPH:quinone oxidoreductase |
| NR | NP_001236686.1 | 8.45E-93 | uncharacterized protein LOC100526972 [Glycine max] |
| COG | NP_249895.1 | 1.00E-31 | hypothetical protein PA1204 [Pseudomonas aeruginosa PAO1] |
| Swissprot | tr|Q9LK88|NQR_ARATH | 7.00E-82 | NADPH:quinone oxidoreductase |
| trEMBL | tr|C6T2X0|C6T2X0_SOYBN | 3.00E-93 | Putative uncharacterized protein {ECO:0000313|EMBL:ACU16008.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00262 | 18030 | 20732 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000262s00020205.1 | PF03358.10 | FMN_red | 14 | 93 | 2.50E-11 |
| Glyur000262s00020205.1 | PF03358.10 | FMN_red | 95 | 142 | 4.30E-07 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.721 |
| SRR1783600 | control | 1.727 |
| SRR1783602 | moderate drought stress | 0.280 |
| SRR1811619 | moderate drought stress | 0.233 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.958 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.946 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.137 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.133 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1.539 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 1.949 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.519 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.876 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 18.551 |
| SRR2868004 | Drought Stress (root) | 66.724 |
| SRR2967015 | Control (root) | 26.643 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.676 |
| SRR9715740 | Leaf | 0.416 |
| SRR9715741 | Leaf | 1.040 |
| SRR9715739 | Root | 0.028 |
| SRR9715742 | Root | 2.746 |
| SRR9715743 | Root | 2.932 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 23.088 |
| SRR8749028 | MeJA induced 9h | 15.754 |
| SRR8749029 | MeJA induced 9h | 14.078 |
| SRR8749030 | Uninduced | 119.541 |
| SRR8749031 | Uninduced | 176.068 |
| SRR8749032 | Uninduced | 58.824 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 9.791 |
| SRR8400027 | Control - Root | 8.238 |