Gene detail

Gene detail information of Glyur000261s00014367

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT2G34460.1	3.00E-101	NAD(P)-binding Rossmann-fold superfamily protein
NR	XP_004508442.1	1.07E-170	PREDICTED: uncharacterized protein At2g34460, chloroplastic-like [Cicer arietinum]
COG	YP_007059606.1	6.00E-56	NmrA-like family protein [Rivularia sp. PCC 7116]
Swissprot	tr\|Q8H124\|Y2446_ARATH	9.00E-128	Uncharacterized protein At2g34460, chloroplastic (Precursor)
trEMBL	tr\|G7JFG1\|G7JFG1_MEDTR	1.00E-165	Uncharacterized protein {ECO:0000313\|EMBL:AFK35548.1}

Sequence

Transcript Sequence

>Glyur000261s00014367.1
AGAAGATCTGTTTGCAATTATTTTATTTTAATTACCTGATTAGTGAAATACAGATAGAATCCTATAATTGGTTCATATCAACCGGTATCGCTACCTCATATGGGTATAGTAGATTCTACCAAAAAAAAAACAGTGAGTTGGGGTAACGTGTTGGTGTTGAAGTACGTGGCAGAGTTAGAGCGTCTTGTTTGGAAGCCTGGAAATTACGAGAGGATAAAAAAACTGTTTTTTTTCACAGTGGCAGAGTCTCAACTCTCAATGGATGTTCCTCTTATTGTTAGAAATCCCACATTCCACACACTGCGATCCCACACTGCATCATCCTCTTTCTTCAAGGCCAAATCTCTTTCCCTCCTCAATTTCGCAAAGATGGAAGGAAGTGAAATAACTGAGCAAGTAGCAGAGAAAGCAGGGGAGGATTTGAGTGTGAAGAAGAAAATTTTTGTTGCTGGAGCCACCGGCAGCACCGGGAAAAGAATCGTTGAGCAGTTACTGGCAAAGGGTTTTGCTGTTAAGGCTGCGGTTAGAGACTTGGACAAGGCCAGGACCACCCTTTCCTCTTCCAACCACCCATCTCTTCAAATTGTGAAAGCTGATGTCACAGAGGGTCCTGACAAGCTAGCTGAAGCCATTGGCGATGATTCAGAAGCAGTAGTATGTGCCACAGGCTTTCGGCCAGGGTGGGATTTGCTTGCTCCATGGAAGGTTGACAATTTCGGCACCGTAAACCTTGTTGAAGCATGCAGGAAACGTAACGTTAACAGATTCATTCTTATAAGTTCCATTTTAGTTAATGGGGCAGCTATGGGACAGCTACTCAATCCAGCTTACATCTTTCTCAATGTTTTCGGACTCACCTTAGTAGCAAAATTGCAGGCAGAGAACCATATAAGGAAATCCGGTATAAATTACACAATAATAAGGCCTGGAGGGTTGAGAAACGATCCTCCTTCCGGAAATATTGTTATGGAGCAAGAGGACACCCTTTATGAAGGTTCTATATCCAGAGACCAAGTTGCAGAAGTAGCTGTGGAAGCATTGGCTTATCCTGAGGCATCTTATAAAGTTGTGGAGATAATGAACCAAGCAACCACAAAGGCAATGACTGCAGCAAGTGCAGCTGGGGCACCAAGATACACTCCTATGCTTTCCATCGGGGTGGGTGGAATTGCAGCAACAACACCTTCAGCCACACTCTCAACCAAACAACAGTGGGTGGAAACCAGTATAGCCATAATGAAGATGGTGAAAACCGTGGCATCCATGGCAACACTTGATCAGGAACTGAGTAAATAG

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00261	159334	162642	-

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

Not hits found.

Not hits found.

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000261s00014367.1	PF13460.1	NAD_binding_10	114	315	3.10E-33

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	26.641
SRR1783600	control	27.256
SRR1783602	moderate drought stress	21.201
SRR1811619	moderate drought stress	21.726

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	31.308
DRR006520	Root Summer glycyrrhizin high producing strain	29.526
DRR006521	Root Winter glycyrrhizin high producing strain	16.862
DRR006522	Root Winter glycyrrhizin high producing strain	16.141
DRR006523	Root Summer glycyrrhizin low producing strain	13.082
DRR006524	Root Summer glycyrrhizin low producing strain	13.105
DRR006525	Leaf Summer glycyrrhizin high producing strain	63.942
DRR006526	Leaf Summer glycyrrhizin high producing strain	62.806

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	22.789
SRR2868004	Drought Stress (root)	15.809
SRR2967015	Control (root)	12.239

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	48.393
SRR9715740	Leaf	77.399
SRR9715741	Leaf	38.035
SRR9715739	Root	11.684
SRR9715742	Root	17.443
SRR9715743	Root	15.418

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	27.556
SRR8749028	MeJA induced 9h	17.901
SRR8749029	MeJA induced 9h	18.360
SRR8749030	Uninduced	3.630
SRR8749031	Uninduced	2.084
SRR8749032	Uninduced	1.583

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	37.124
SRR8400027	Control - Root	34.053