Gene detail

Gene detail information of Glyur000261s00014365

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT2G34470.2	5.00E-130	urease accessory protein G
NR	KHN28964.1	1.31E-170	Putative urease accessory protein ureG-like [Glycine soja]
COG	YP_005373623.1	8.00E-101	urease accessory protein UreG [Corallococcus coralloides DSM 2259]
Swissprot	tr\|O64700\|UREG_ARATH	1.00E-163	Urease accessory protein G
trEMBL	tr\|C6T9B1\|C6T9B1_SOYBN	2.00E-170	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA08G08970.1}

Sequence

Transcript Sequence

>Glyur000261s00014365.1
GTCGTGTTGTTCTCATTTTCACACTCACCAGTGGAGAAAGTTTTGAGTTCAGTAAAATCCAATTCTAATGGCTTCTGAAGGCGCTCACCACCACCACCACCACCACCATGAGCACGAGCATTCGGATCACGGAGATGGAAAGTCCTGGGTAGGTCCTGATGGGAAGGTGTACCATAGCCACGATGGTCTAGCGCCGCATTCTCACGAACCCATCTACTCTCCTGGGTTCTTCAGCAGAAGGGCTCAACCCATTCTCAACAGAAACTTCAATGAAAGAGCCTTCACTGTTGGCATCGGTGGCCCCGTCGGTACTGGGAAAACGGCTTTAATGTTGGCCCTCTGTGANTATTTGCGGGATAATTACAGTCTCGCTGCAGTAACGAATGATATATTCACGAANGAAGATGGTGAGTTCTTGGTGAGACACAAAGCACTTCCAGAGGAAAGGATACGTGCTGTAGAAACTGGGGGTTGCCCACATGCTGCAATTCGGGAGGACATCAGTATTAATCTTGGACCGCTGGAGGAGCTTTCAAACCTGTACAAAGCAGATATACTTCTTTGTGAATCCGGGGGAGATAACCTGGCTGCCAATTTCAGCAGGGAACTGGCTGACTATATTATTTACATAATAGATGTATCTGGTGGTGATAAAATTCCTCGGAAAGGTGGTCCTGGAATCACACAAGCTGATCTCCTTGTGATAAACAAGACTGACCTTGCACCAGCAATTGGGGCTGACTTGGCAGTCATGCAGCGGGATGCTCTTCGGATGAGAGATGGGGGGCCATTTGTCTTTGCACAGGTGAAGCATAAGATTGGGGTAGAAGAAATTGTGAGTCATGTCTTACAAGCATGGGAAGCAGCTACAGGGAAAAAGAAACATTGTTGACATTTCTTTGAAAAATGGCTTCTGTTGTCTTATCATGCATGTTAAATAACTACTTCAGAAACATGTTACTACTTGGACCTAATAAGTGTGTATGAGTTCTCTTCTCTA

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00261	147474	150721	-

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0006807 nitrogen compound metabolic process

molecular_function

GO:0003924 GTPase activity

GO:0016151 nickel cation binding

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000261s00014365.1	PF02492.14	cobW	74	242	7.90E-32

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	103.560
SRR1783600	control	104.184
SRR1783602	moderate drought stress	62.344
SRR1811619	moderate drought stress	61.891

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	154.746
DRR006520	Root Summer glycyrrhizin high producing strain	151.704
DRR006521	Root Winter glycyrrhizin high producing strain	88.170
DRR006522	Root Winter glycyrrhizin high producing strain	84.111
DRR006523	Root Summer glycyrrhizin low producing strain	56.045
DRR006524	Root Summer glycyrrhizin low producing strain	54.894
DRR006525	Leaf Summer glycyrrhizin high producing strain	102.752
DRR006526	Leaf Summer glycyrrhizin high producing strain	102.568

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	125.794
SRR2868004	Drought Stress (root)	80.890
SRR2967015	Control (root)	83.637

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	121.191
SRR9715740	Leaf	113.953
SRR9715741	Leaf	115.610
SRR9715739	Root	80.618
SRR9715742	Root	121.475
SRR9715743	Root	105.455

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	113.808
SRR8749028	MeJA induced 9h	48.985
SRR8749029	MeJA induced 9h	107.301
SRR8749030	Uninduced	6.655
SRR8749031	Uninduced	1.608
SRR8749032	Uninduced	6.454

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	201.116
SRR8400027	Control - Root	206.593