Gene detail information of Glyur000261s00014364 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G18260.1 | 1.00E-62 | Cytochrome b561/ferric reductase transmembrane protein family |
| NR | XP_004504684.1 | 1.64E-154 | PREDICTED: uncharacterized protein LOC101490308 [Cicer arietinum] |
| Swissprot | tr|Q0WPS2|B561M_ARATH | 2.00E-78 | Cytochrome b561 domain-containing protein At4g18260 (Precursor) |
| trEMBL | tr|A0A097PHP3|A0A097PHP3_MEDTR | 2.00E-152 | Cytochrome B561-like protein {ECO:0000313|EMBL:AIU47059.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00261 | 137654 | 139570 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000261s00014364.1 | PF03188.11 | Cytochrom_B561 | 53 | 179 | 4.60E-09 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.353 |
| SRR1783600 | control | 1.391 |
| SRR1783602 | moderate drought stress | 0.939 |
| SRR1811619 | moderate drought stress | 0.842 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 7.245 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 6.809 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.924 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1.037 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 4.685 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 4.676 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.196 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.103 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 16.658 |
| SRR2868004 | Drought Stress (root) | 13.197 |
| SRR2967015 | Control (root) | 21.963 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.212 |
| SRR9715740 | Leaf | 0.135 |
| SRR9715741 | Leaf | 0.410 |
| SRR9715739 | Root | 0.469 |
| SRR9715742 | Root | 2.099 |
| SRR9715743 | Root | 2.008 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.375 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 9.703 |
| SRR8400027 | Control - Root | 12.596 |