Gene detail

Gene detail information of Glyur000261s00014344.1

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT1G31070.2	0	N-acetylglucosamine-1-phosphate uridylyltransferase 1
NR	XP_007158894.1	0	hypothetical protein PHAVU_002G190700g [Phaseolus vulgaris]
COG	YP_004645413.1	4.00E-94	UDP-N-acetylglucosamine pyrophosphorylase [Paenibacillus mucilaginosus KNP414]
Swissprot	tr\|Q940S3\|UAP1_ARATH	0	UDP-N-acetylglucosamine diphosphorylase 1
trEMBL	tr\|V7CNE6\|V7CNE6_PHAVU	0	Uncharacterized protein {ECO:0000313\|EMBL:ESW30888.1}

Sequence

Transcript Sequence

>Glyur000261s00014344.1
GATTTTTTATCTTTTTCTTCTGCGTCGAAATTAGAGGTAAAATAGAATTGATTGATGATAACAGCACTGCATTGCTGTCACGAGTGAGAACAAAAGAGGAGTGAGAGGGGGCATTTGGGTCATTAGAGGTGAGTGAAGGAAAGAGGGTGGTTACTGATTTGATTCTTGTCTTCCTCGCCACTGTTCCCCCTGTTGCCATAAGTCCATACCATAACCAACCAACAATACATTAACACTCAACCTCACTCGCTTCAGAATTTGTTTGAGATCTGAAATTGAAGAGAGAGAGAGAGATGAGGGAACCGTCGTCGGTGGGAATCGAAGGCAACGGCGTCGTTTCTGCGCCGCCTCAAGCGCTCCTCGAGAGGCTCAAAGACTACGGTCAGGAAGACGTTTTTGCCCTCTGGGATGAGCTCTCCCACGAGGAACGCGACTTTCTCGTCAAGGACATCGAGAGTTTAGATCTCTCGAGAATCGATCGGATTATTCGGTGTTCACTACGGTCTCAAGGGCTGCCGGCAGCTGTAATTGAACCTGTGCCGGAGAGCAGTGTGTCGACGGTGGAGGAGCGAAGCCAAGAGGAACGAGAGAGATGGTGGAAAATGGGATTGAAGGCTATTTCAGAGGGCAAGTTAGCTGTCTTGCTTTTATCTGGTGGCCAGGGGACTAGGCTTGGAAGTTCAGATCCAAAAGGATGTTTCAATGTTGGACTTCCATCTGGAAAATCACTTTTTCAACTTCAAGCTGAGAGGATTTTGTGTGTACAGAGATTAGCTGCTCAAGCTACAAATGAGAATTCTGCTTCTTCTGCGCAAATACACTGGTACATAATGACTAGTCCATTCACTGATGAGGCAACACGCAAATACTTTGAAAGTCATAAATTCTTTGGTCTTGAATCCGAACAGGTTACCTTCTTCCAGCAAGGGACCATCCCTTGTGTTTCCAAGGATGGTAGATTTATTATGGAGACTCCATACAGGGTAGCAAAGGCTCCTGATGGGAATGGTGGAGTGTATTCAGCTCTGAAATATACCAAATTACTGGATGATATGGCCTCAAAAGGAATTAAGTATATTGATTGCTATGGAGTTGACAATGCACTGGTTCGGGTTGCTGATCCATCTTTTTTAGGTTACTTCATTGACAAAGGTGTTGCTGCTGCAGCAAAAGTTGTCCGCAAGGCATATCCACAAGAAAAGGTTGGTGTGTTTGTACGACGAGGTAAAGGTGGTCCTCTAACTGTAGTTGAATACAGCGAGTTGGACCCATCACTAGCTTCTGCAGTCAATCAAGCAACTGGCCGTCTTCGTTTTTGTTGGAGTAATGTCTGCTTACACATGTTTACTTTGGATTTTCTAAACCAAGTGGCAAATGGCCTTGAAAAGGACAGCATTTACCATCTTGCAGAGAAGAAAATTCCTTCCATACACGGATATACTATGGGATTAAAACTNGAACAGTTTATATTTGATGCGTTTCCATATGCTCCTACGACTGCGCTTTTTGAGGTATTACGAGAGGAGGAATTTGCACCAGTAAAAAATGCAAATGGGTCCAATTTTGACACTCCAGATAGTGCTAAACTGCTTGTTCTTCGACTCCATACTCGTTGGGTAGTTGCAGCAGGTGGCTTCTTAACACATTCGGTGCCCTTATATGCAACAGGTGTTGAAGTGTCGCCACTATGTTCATACGCGGGTGAAAACCTGGAACCTATATGTCGAGGAAGAACTTTCCACGCACCTTGTGAGATTACATTCTAGTTCCATCCCGTTTGTGCGGCTTTGTTGTGACTTATACTGCAATGAGGGAGTTCTCGGTCCCATGCATGCGTGTTTGAAGATAATGCCCCTCATCATTCACTTGTATCAGTATATATGTATCTTCTCCAATCTGTTTCTGATTGCCTTTTATTTTTTTGATCACTGATCTGTTTTAGTGTTTGCTAAGGGATTGTACATGTATCATAATTTTACTGACCATTTATTTGCCCATGCAGACTCGAATATGTCATCCCATTTTTCCCTCTATTTCCCGAATTAATTCATTCCATGGTCCATACTTCTTTATTGCATTGTTAATACTTAATAGTAGTATTTTACTCGTTGCCTGAGGAAATTCGGGGAGCACTAGCACAGGTGATGAGGAAATGGCACAAGGGGCTGTAAATCCCTGCCCGTCCAACAAGCAAATTCGCTTTCCATGTTGGATTTGAATTACGTGCTTTACTTTATGAATTAATGTACTGTGAGAAATTAAGTTCTACAGATTTCTACTNCAGAGTCTTGT

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00261	14586	24597	+

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
K00972	UAP1	EC:2.7.7.23 2.7.7.83	Amino sugar and nucleotide sugar metabolism	map00520

Gene Ontology

biological_process
GO:0008152 metabolic process

molecular_function
GO:0070569 uridylyltransferase activity

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000261s00014344.1	PF01704.13	UDPGP	100	420	4.00E-46

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	37.210
SRR1783600	control	37.469
SRR1783602	moderate drought stress	28.471
SRR1811619	moderate drought stress	28.234

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	52.198
DRR006520	Root Summer glycyrrhizin high producing strain	51.311
DRR006521	Root Winter glycyrrhizin high producing strain	71.212
DRR006522	Root Winter glycyrrhizin high producing strain	68.885
DRR006523	Root Summer glycyrrhizin low producing strain	32.524
DRR006524	Root Summer glycyrrhizin low producing strain	32.455
DRR006525	Leaf Summer glycyrrhizin high producing strain	16.172
DRR006526	Leaf Summer glycyrrhizin high producing strain	16.070

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	103.194
SRR2868004	Drought Stress (root)	94.495
SRR2967015	Control (root)	102.890

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	38.453
SRR9715740	Leaf	34.351
SRR9715741	Leaf	44.411
SRR9715739	Root	36.594
SRR9715742	Root	67.613
SRR9715743	Root	58.795

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	85.789
SRR8749028	MeJA induced 9h	43.970
SRR8749029	MeJA induced 9h	58.910
SRR8749030	Uninduced	37.159
SRR8749031	Uninduced	37.884
SRR8749032	Uninduced	37.439

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	127.587
SRR8400027	Control - Root	126.465