Gene detail information of Glyur000260s00013534 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G25050.1 | 5.00E-29 | acyl carrier protein 4 |
| NR | XP_004503797.1 | 1.09E-77 | PREDICTED: acyl carrier protein 4, chloroplastic-like isoform X1 [Cicer arietinum] |
| COG | YP_002508781.1 | 6.00E-16 | acyl carrier protein [Halothermothrix orenii H 168] |
| Swissprot | tr|P93092|ACP1_CASGL | 1.00E-44 | Acyl carrier protein 1, chloroplastic (Precursor) |
| trEMBL | tr|I1K6S2|I1K6S2_SOYBN | 6.00E-73 | Acyl carrier protein {ECO:0000256|RuleBase:RU000722} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00260 | 112713 | 114260 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000260s00013534.1 | PF00550.20 | PP-binding | 61 | 127 | 2.90E-13 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.000 |
| SRR1783600 | control | 0.000 |
| SRR1783602 | moderate drought stress | 0.055 |
| SRR1811619 | moderate drought stress | 0.056 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 7.587 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 7.393 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.361 |
| SRR2868004 | Drought Stress (root) | 0.059 |
| SRR2967015 | Control (root) | 0.074 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 14.209 |
| SRR9715740 | Leaf | 3.941 |
| SRR9715741 | Leaf | 4.258 |
| SRR9715739 | Root | 0.072 |
| SRR9715742 | Root | 0.000 |
| SRR9715743 | Root | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.228 |
| SRR8400027 | Control - Root | 0.198 |