Gene detail information of Glyur000260s00013532 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G48860.2 | 7.00E-118 | |
| NR | XP_004501741.1 | 0 | PREDICTED: uncharacterized abhydrolase domain-containing protein DDB_G0269086-like isoform X1 [Cicer arietinum] |
| Swissprot | tr|Q8RWD5|SCD2_ARATH | 0 | Coiled-coil domain-containing protein SCD2 {ECO:0000305} |
| trEMBL | tr|I1KBY5|I1KBY5_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA06G17390.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00260 | 102432 | 109161 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 5.618 |
| SRR1783600 | control | 5.532 |
| SRR1783602 | moderate drought stress | 11.745 |
| SRR1811619 | moderate drought stress | 11.515 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 6.336 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 6.247 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 27.146 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 26.606 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 5.587 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 5.851 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 6.483 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 6.449 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 7.629 |
| SRR2868004 | Drought Stress (root) | 10.281 |
| SRR2967015 | Control (root) | 11.039 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 9.054 |
| SRR9715740 | Leaf | 14.043 |
| SRR9715741 | Leaf | 13.255 |
| SRR9715739 | Root | 8.057 |
| SRR9715742 | Root | 7.635 |
| SRR9715743 | Root | 9.045 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 8.083 |
| SRR8749028 | MeJA induced 9h | 9.696 |
| SRR8749029 | MeJA induced 9h | 6.730 |
| SRR8749030 | Uninduced | 14.008 |
| SRR8749031 | Uninduced | 9.446 |
| SRR8749032 | Uninduced | 10.951 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 15.149 |
| SRR8400027 | Control - Root | 12.188 |