Gene detail information of Glyur000259s00016765 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G11780.1 | 2.00E-20 | MD-2-related lipid recognition domain-containing protein / ML domain-containing protein |
| NR | XP_004491129.1 | 2.75E-66 | PREDICTED: phosphatidylglycerol/phosphatidylinositol transfer protein-like [Cicer arietinum] |
| trEMBL | tr|I3SDT8|I3SDT8_LOTJA | 2.00E-66 | Uncharacterized protein {ECO:0000313|EMBL:AFK38430.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00259 | 194502 | 197387 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000259s00016765.1 | PF02221.10 | E1_DerP2_DerF2 | 65 | 174 | 1.10E-08 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1300.366 |
| SRR1783600 | control | 1289.466 |
| SRR1783602 | moderate drought stress | 473.328 |
| SRR1811619 | moderate drought stress | 469.380 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 375.052 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 365.926 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1.022 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.991 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 79.928 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 77.905 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 10.492 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 10.014 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 442.852 |
| SRR2868004 | Drought Stress (root) | 129.145 |
| SRR2967015 | Control (root) | 167.026 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 19.916 |
| SRR9715740 | Leaf | 6.487 |
| SRR9715741 | Leaf | 8.960 |
| SRR9715739 | Root | 419.550 |
| SRR9715742 | Root | 802.690 |
| SRR9715743 | Root | 707.291 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 25.319 |
| SRR8749028 | MeJA induced 9h | 12.032 |
| SRR8749029 | MeJA induced 9h | 17.421 |
| SRR8749030 | Uninduced | 2.055 |
| SRR8749031 | Uninduced | 0.545 |
| SRR8749032 | Uninduced | 8.101 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 815.515 |
| SRR8400027 | Control - Root | 723.607 |