Gene detail information of Glyur000258s00015279 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G39570.1 | 2.00E-22 | |
| NR | XP_003554616.1 | 5.54E-82 | PREDICTED: uncharacterized protein At5g39570-like isoform X1 [Glycine max] |
| Swissprot | tr|Q9FKA5|Y5957_ARATH | 4.00E-44 | Uncharacterized protein At5g39570 |
| trEMBL | tr|I1N675|I1N675_SOYBN | 2.00E-82 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA19G03040.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00258 | 213175 | 216288 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 175.465 |
| SRR1783600 | control | 187.344 |
| SRR1783602 | moderate drought stress | 198.104 |
| SRR1811619 | moderate drought stress | 209.773 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 213.801 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 211.079 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 91.632 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 92.688 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 137.566 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 141.518 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 101.042 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 99.250 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 355.724 |
| SRR2868004 | Drought Stress (root) | 279.825 |
| SRR2967015 | Control (root) | 295.872 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 129.937 |
| SRR9715740 | Leaf | 100.210 |
| SRR9715741 | Leaf | 127.616 |
| SRR9715739 | Root | 309.962 |
| SRR9715742 | Root | 355.878 |
| SRR9715743 | Root | 351.717 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 99.609 |
| SRR8749028 | MeJA induced 9h | 93.752 |
| SRR8749029 | MeJA induced 9h | 70.642 |
| SRR8749030 | Uninduced | 25.609 |
| SRR8749031 | Uninduced | 17.311 |
| SRR8749032 | Uninduced | 22.302 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 330.594 |
| SRR8400027 | Control - Root | 347.531 |