Gene detail information of Glyur000258s00015276 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G39530.1 | 4.00E-47 | Protein of unknown function (DUF1997) |
| NR | KHN13202.1 | 3.53E-119 | hypothetical protein glysoja_016379 [Glycine soja] |
| trEMBL | tr|C6TBQ5|C6TBQ5_SOYBN | 4.00E-119 | Putative uncharacterized protein {ECO:0000313|EMBL:ACU19257.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00258 | 197729 | 199664 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000258s00015276.1 | PF09366.5 | DUF1997 | 63 | 225 | 7.50E-35 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 7.538 |
| SRR1783600 | control | 7.810 |
| SRR1783602 | moderate drought stress | 1.709 |
| SRR1811619 | moderate drought stress | 1.963 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 21.825 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 19.366 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 2.193 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 2.785 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 24.350 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 23.424 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.853 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.090 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 6.302 |
| SRR2868004 | Drought Stress (root) | 6.367 |
| SRR2967015 | Control (root) | 9.532 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.733 |
| SRR9715740 | Leaf | 0.801 |
| SRR9715741 | Leaf | 1.005 |
| SRR9715739 | Root | 0.115 |
| SRR9715742 | Root | 5.441 |
| SRR9715743 | Root | 3.660 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.080 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.042 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 5.200 |
| SRR8400027 | Control - Root | 6.881 |