Gene detail information of Glyur000258s00015268 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G13700.1 | 0 | purple acid phosphatase 23 |
| NR | XP_006603888.1 | 0 | PREDICTED: purple acid phosphatase 23-like isoform X2 [Glycine max] |
| COG | YP_004344045.1 | 1.00E-20 | metallophosphoesterase [Fluviicola taffensis DSM 16823] |
| Swissprot | tr|Q6TPH1|PPA23_ARATH | 0 | Purple acid phosphatase 23 (Precursor) |
| trEMBL | tr|K7MW57|K7MW57_SOYBN | 0 | Purple acid phosphatase {ECO:0000256|RuleBase:RU361203} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00258 | 144558 | 149734 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000258s00015268.1 | PF00149.23 | Metallophos | 174 | 387 | 2.60E-21 |
| Glyur000258s00015268.2 | PF00149.23 | Metallophos | 174 | 387 | 2.30E-21 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 2.585 |
| SRR1783600 | control | 2.489 |
| SRR1783602 | moderate drought stress | 4.463 |
| SRR1811619 | moderate drought stress | 4.441 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 3.558 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 3.230 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1.652 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1.505 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 3.641 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 3.520 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.536 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.380 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 26.494 |
| SRR2868004 | Drought Stress (root) | 14.896 |
| SRR2967015 | Control (root) | 17.535 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 2.293 |
| SRR9715740 | Leaf | 1.054 |
| SRR9715741 | Leaf | 1.927 |
| SRR9715739 | Root | 0.345 |
| SRR9715742 | Root | 3.121 |
| SRR9715743 | Root | 3.032 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 1.363 |
| SRR8749028 | MeJA induced 9h | 1.893 |
| SRR8749029 | MeJA induced 9h | 0.645 |
| SRR8749030 | Uninduced | 0.792 |
| SRR8749031 | Uninduced | 0.293 |
| SRR8749032 | Uninduced | 0.324 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 20.495 |
| SRR8400027 | Control - Root | 32.580 |