Gene detail information of Glyur000258s00015255 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G01060.2 | 3.00E-147 | |
| NR | XP_004489439.1 | 0 | PREDICTED: uncharacterized protein LOC101501957 [Cicer arietinum] |
| trEMBL | tr|I1LWQ0|I1LWQ0_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA13G05880.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00258 | 76063 | 80128 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000258s00015255.1 | PF14234.1 | DUF4336 | 106 | 219 | 3.60E-43 |
| Glyur000258s00015255.1 | PF14234.1 | DUF4336 | 215 | 349 | 5.90E-39 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 6.719 |
| SRR1783600 | control | 6.760 |
| SRR1783602 | moderate drought stress | 8.617 |
| SRR1811619 | moderate drought stress | 8.605 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 3.134 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 3.126 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 3.014 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 2.845 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 6.575 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 6.552 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 44.581 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 44.182 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 13.580 |
| SRR2868004 | Drought Stress (root) | 20.097 |
| SRR2967015 | Control (root) | 14.236 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 71.376 |
| SRR9715740 | Leaf | 88.325 |
| SRR9715741 | Leaf | 73.176 |
| SRR9715739 | Root | 8.687 |
| SRR9715742 | Root | 8.657 |
| SRR9715743 | Root | 7.277 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 2.843 |
| SRR8749028 | MeJA induced 9h | 7.335 |
| SRR8749029 | MeJA induced 9h | 2.274 |
| SRR8749030 | Uninduced | 1.482 |
| SRR8749031 | Uninduced | 0.570 |
| SRR8749032 | Uninduced | 1.045 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 12.546 |
| SRR8400027 | Control - Root | 11.458 |