Gene detail information of Glyur000257s00022022 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | XP_004489647.1 | 1.98E-30 | PREDICTED: uncharacterized protein LOC101490115 [Cicer arietinum] |
| trEMBL | tr|I1MKV6|I1MKV6_SOYBN | 2.00E-25 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA16G03960.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00257 | 92756 | 94284 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 105.051 |
| SRR1783600 | control | 104.404 |
| SRR1783602 | moderate drought stress | 144.726 |
| SRR1811619 | moderate drought stress | 145.672 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 211.110 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 207.512 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 378.084 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 371.167 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 270.242 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 271.854 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 10.448 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 10.410 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 155.580 |
| SRR2868004 | Drought Stress (root) | 263.507 |
| SRR2967015 | Control (root) | 295.308 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 10.882 |
| SRR9715740 | Leaf | 26.017 |
| SRR9715741 | Leaf | 25.957 |
| SRR9715739 | Root | 45.811 |
| SRR9715742 | Root | 121.971 |
| SRR9715743 | Root | 95.166 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 638.749 |
| SRR8749028 | MeJA induced 9h | 1106.237 |
| SRR8749029 | MeJA induced 9h | 940.209 |
| SRR8749030 | Uninduced | 440.813 |
| SRR8749031 | Uninduced | 212.385 |
| SRR8749032 | Uninduced | 488.802 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 144.401 |
| SRR8400027 | Control - Root | 107.133 |