Gene detail information of Glyur000257s00022016.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G17810.2 | 6.00E-27 | WUSCHEL related homeobox 12 |
| NR | XP_004489665.1 | 1.85E-88 | PREDICTED: WUSCHEL-related homeobox 11-like [Cicer arietinum] |
| Swissprot | tr|Q6X7J3|WOX11_ARATH | 6.00E-65 | WUSCHEL-related homeobox 11 |
| trEMBL | tr|V7C3M7|V7C3M7_PHAVU | 6.00E-86 | Uncharacterized protein {ECO:0000313|EMBL:ESW23511.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00257 | 27396 | 30544 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | HB |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000257s00022016.1 | PF00046.24 | Homeobox | 33 | 93 | 6.80E-13 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.215 |
| SRR1783600 | control | 0.173 |
| SRR1783602 | moderate drought stress | 0.044 |
| SRR1811619 | moderate drought stress | 0.044 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.235 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.229 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 1.443 |
| SRR2868004 | Drought Stress (root) | 1.877 |
| SRR2967015 | Control (root) | 0.736 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.000 |
| SRR9715740 | Leaf | 0.000 |
| SRR9715741 | Leaf | 0.000 |
| SRR9715739 | Root | 0.216 |
| SRR9715742 | Root | 0.000 |
| SRR9715743 | Root | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 109.535 |
| SRR8749028 | MeJA induced 9h | 102.671 |
| SRR8749029 | MeJA induced 9h | 56.788 |
| SRR8749030 | Uninduced | 48.102 |
| SRR8749031 | Uninduced | 14.519 |
| SRR8749032 | Uninduced | 21.028 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.352 |
| SRR8400027 | Control - Root | 0.293 |