Gene detail information of Glyur000256s00016268 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G01860.1 | 3.00E-19 | |
| NR | NP_001235405.1 | 1.37E-112 | uncharacterized protein LOC100306206 [Glycine max] |
| Swissprot | tr|Q9LK32|Y3721_ARATH | 7.00E-22 | Uncharacterized protein At3g27210 |
| trEMBL | tr|C6SYF2|C6SYF2_SOYBN | 5.00E-113 | Putative uncharacterized protein {ECO:0000313|EMBL:ACU14275.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00256 | 174306 | 177825 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 33.282 |
| SRR1783600 | control | 34.795 |
| SRR1783602 | moderate drought stress | 38.069 |
| SRR1811619 | moderate drought stress | 38.307 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 50.543 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 50.167 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 85.531 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 82.636 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 88.443 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 85.519 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 24.597 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 24.363 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 22.693 |
| SRR2868004 | Drought Stress (root) | 35.480 |
| SRR2967015 | Control (root) | 33.764 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 23.960 |
| SRR9715740 | Leaf | 46.817 |
| SRR9715741 | Leaf | 35.809 |
| SRR9715739 | Root | 11.370 |
| SRR9715742 | Root | 35.854 |
| SRR9715743 | Root | 29.373 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 32.063 |
| SRR8749028 | MeJA induced 9h | 47.435 |
| SRR8749029 | MeJA induced 9h | 19.259 |
| SRR8749030 | Uninduced | 66.794 |
| SRR8749031 | Uninduced | 26.960 |
| SRR8749032 | Uninduced | 16.500 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 39.310 |
| SRR8400027 | Control - Root | 38.936 |