Gene detail information of Glyur000256s00016252 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G02740.1 | 4.00E-27 | Ribosomal protein S24e family protein |
| NR | XP_004489610.1 | 2.08E-81 | PREDICTED: uncharacterized protein LOC101505070 [Cicer arietinum] |
| trEMBL | tr|A0A072UI29|A0A072UI29_MEDTR | 6.00E-78 | Ribosomal protein S24e family protein, putative {ECO:0000313|EMBL:KEH25455.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00256 | 87254 | 92304 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 45.060 |
| SRR1783600 | control | 45.649 |
| SRR1783602 | moderate drought stress | 56.900 |
| SRR1811619 | moderate drought stress | 57.338 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 41.805 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 40.677 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 18.276 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 18.247 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 30.594 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 28.646 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 43.737 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 41.918 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 33.123 |
| SRR2868004 | Drought Stress (root) | 21.612 |
| SRR2967015 | Control (root) | 20.343 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 35.375 |
| SRR9715740 | Leaf | 28.236 |
| SRR9715741 | Leaf | 31.121 |
| SRR9715739 | Root | 13.394 |
| SRR9715742 | Root | 22.702 |
| SRR9715743 | Root | 18.566 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 18.939 |
| SRR8749028 | MeJA induced 9h | 11.659 |
| SRR8749029 | MeJA induced 9h | 13.745 |
| SRR8749030 | Uninduced | 2.928 |
| SRR8749031 | Uninduced | 1.041 |
| SRR8749032 | Uninduced | 1.513 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 43.038 |
| SRR8400027 | Control - Root | 40.092 |