Gene detail

Gene detail information of Glyur000256s00016251

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT3G01910.1	1.00E-125	sulfite oxidase
NR	XP_004489611.1	0	PREDICTED: sulfite oxidase-like [Cicer arietinum]
COG	YP_003799481.1	1.00E-33	putative sulfite:cytochrome c oxidoreductase subunit A [Candidatus Nitrospira defluvii]
Swissprot	tr\|Q9S850\|SUOX_ARATH	2.00E-156	Sulfite oxidase
trEMBL	tr\|A0A072U8N7\|A0A072U8N7_MEDTR	0	Sulfite oxidase-like protein {ECO:0000313\|EMBL:KEH25463.1}

Sequence

Transcript Sequence

>Glyur000256s00016251.1
CGCCACCAAAAATGAATCCTTTCCTTTCTGTGCAGGACGCCATGACAGTGCTCTTCTTCTTCTTATAACTTGTAGCACTCCATTTTCCTGTGTTTAACTTTAATTAATTGCTTCTCTTCATCCTTTCTTCATTCCCAGCACCGAAATGGCANCAGGACTCATAGGACCCTCCGATTATTCCAAAGAGCCTCCTCGCCACCCTTCTCTTCAAATCAACGCCAAGGCAACTCAAACCTCCTTGTTCAACTCAACAACCCTTATCATCAATCATCATTATCAATAACAAAACGGCAATTCTCATCTGCGTTTCGTTTCGTTTCCCCGCAGGAACCCTTCAACGCGGAGCCACATCGTTCGGCGCTGATTGCCTCCTACCTCACCCCTTCTGATTTCTTCTACAAGAGGAACCACGGCCCTATTCCCATCGTTGATGACATCAACAGATACCGAGTGGTGATATCTGGTCTGGTGGAGCGTCCCAAACAGCTCTTCATGAAAGATATCAGGAAGCTTCCGAAGTATAATGTAACTGCCACACTGCAGTGCGCAGGGAATCGTAGGACTGCTATGAGCAAGACCAGACCAGTGAAAGGGGTTGGGTGGGATGTTTCTGCTATTGGAAATGCTGTCTGGGGCGGTGCCAAATTGGCCGATGTTCTTGAACTTGTTGGAATTCCAAAGTTGACAAGTGTCACTCAATTTGGTGGAAAACATGTTGAGTTTGTAAGCGTTGATAAGTGTAAGGAGGAGAAAGGAGGCCCATATAAGGCTTCAATACCACTCAGTCAGGCTGCAAATCCTGAAGCAGATGTTCTACTTGCTTATGAAATGAATGGAGAACCTCTTAACAGGGATCATGGGTACCCATTACGTGTGGTTGTTCCGGGTGTCATTGGAGCACGGTCTGTTAAATGGCTAGATGCTATCAACATCATTGCAGAAGAATGCCAGTGTGTTATATGTTCTTTGGAAGACGTGAGCACAATAAAGCCTGGGAAGGTAAAAATTAGCGGATACGCAGCATCAGGTGGGGGCAGAGGCATTGAGAGAGTAGATGTGTCTGTTGATGGAGGCAAAACTTGGATTGAATCCTCAAGATTTCAAAAAAAGGGCATTCCCTATATAGCAGATGATGCCAACAGTGACAAATGGGCGTGGGTGCTATTTGAGGTCACAGCTGATATTCTTCACAGCACAGAGATTATTGCAAAAGCGGTGGATTCAGCTGCAAATGTCCAACCTGAAAAGGTTGAAGACATTTGGAACCTTAGAGGGATATTAAACACTTCATGGCATCGGGTACAAGTTCAAGCGAGTCACTCAAATTTGTAAAAGTTGTACTAGCTAGCTATGCAATCAAGCCTTTAACCCCTTTAACTGCCCTCCAAATTTAATGTTCAGTGGTTTTTGAATCATCTCACTGAACAGTGAAACTCTCAACGAGCATTGCGGTCAACTGGTATAAAAAGCTTTTATACACAAATGAGTTATAGGGAAAGGGGTTGTTATTATGAATAATCACTTAAGTTTCTTCAAGGAATTACTTTGAGATCATAAACATGAAGCATCTGGCACTTCGAATTTCATCTATCTTATATCAT

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00256	79723	85799	+

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
K00387	SUOX	EC:1.8.3.1	Sulfur metabolism	map00920

Gene Ontology

biological_process

GO:0042128 nitrate assimilation

GO:0055114 oxidation-reduction process

molecular_function

GO:0016491 oxidoreductase activity

GO:0030151 molybdenum ion binding

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000256s00016251.1	PF00174.14	Oxidored_molyb	1	153	4.90E-45
Glyur000256s00016251.1	PF03404.11	Mo-co_dimer	151	274	5.40E-33

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	31.398
SRR1783600	control	31.665
SRR1783602	moderate drought stress	31.779
SRR1811619	moderate drought stress	31.489

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	42.987
DRR006520	Root Summer glycyrrhizin high producing strain	41.993
DRR006521	Root Winter glycyrrhizin high producing strain	107.625
DRR006522	Root Winter glycyrrhizin high producing strain	103.546
DRR006523	Root Summer glycyrrhizin low producing strain	65.452
DRR006524	Root Summer glycyrrhizin low producing strain	63.449
DRR006525	Leaf Summer glycyrrhizin high producing strain	27.396
DRR006526	Leaf Summer glycyrrhizin high producing strain	27.315

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	40.341
SRR2868004	Drought Stress (root)	44.785
SRR2967015	Control (root)	44.029

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	36.371
SRR9715740	Leaf	41.807
SRR9715741	Leaf	37.790
SRR9715739	Root	17.782
SRR9715742	Root	24.156
SRR9715743	Root	23.998

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	22.484
SRR8749028	MeJA induced 9h	24.858
SRR8749029	MeJA induced 9h	16.076
SRR8749030	Uninduced	41.452
SRR8749031	Uninduced	18.877
SRR8749032	Uninduced	22.783

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	56.082
SRR8400027	Control - Root	48.408